Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g4081 ATGAATGGTGAAGGTGACATGTGTGTTAAAAATTCTAGTATCATGCTCTTTGGCATAAAGATTCAGGCCAACTCTTCAACCATGATTTCTTGCAGTAACTCAAAGTCTAAAGGAATTGAAATGCCTCATAATGAAAACGTTGAGAATTCAAAGAATTTTTCTTCTAAGGAAAATGAATCAAAAGTTAATACAAGCACTGTGGAAGACAAAGTCCTCAAGAAACCAGACAAGATTGTTCAATGTCCAAGATGCAACAGTTTTGACACAAAATTTTGTTATTTCAACAATTACAACGTCAGTCAACCTCGGCATTTCTGTCGGAGTTGTCACAGATATTGGACCGCCGGTGGAACAATGAGAAATGTTGCAGTCGGTGCAGGGAGACGGAAGAACAAACACATAGCTTCTCAATATCGCCACATGATTGTAGCGTCCGATGGAATTCCGAACTCAAGTTTAGAAAGCACCACCAGCGATCTTTCTAGGTACCAAAATGTTTCAACTATTGATTCTGCTGCGGTTTTCAGGTGTTCAAATGATAATGGTATTGTCCTTAAATTTGGTCTAGATAATGCCTCTCTCCACGAATCTAATGGTTCGATGTTTAATCCTAAAAACCGCAAGAGAAATGTTAATGCAAGTGCTAACAATTGTAGAGAAAACGGAGACGAAGAATCATCGTTATGTCTATCTTCTGTGACGAATGGTTATACTCGAGGAAACGAGTTATCCAAATTTGAACATAATAGGTCAAAACCATTGCAGAGTTACCCTGCATCTTCATGGATGATTCCATTGAATCAAAGCTTGAACAATGTTACTTCCATGGTTCAATCTTCAATGCAAATGTGTAACCCTTATGGCATTGATCCTACTTCAATGCAGTGGTGTCACACACCGATGGTTGTGGTTACGGATATTTCAACACCAAACATTGGCTTGCAGTTTTTTCCTGGCTCATACAAGAATGGATCAGTTTCAATAGGTTCAAATGGTTGCATTTCACCTTCTTCATCTACTAATAATAGTTGTTGCTCAGGTAATGGATCGCCGATCATTGGAGAACATACTAGAGATTGTGTTTCGATTGATGAAACTAATTTTCGATAG 1110 0.3829 MNGEGDMCVKNSSIMLFGIKIQANSSTMISCSNSKSKGIEMPHNENVENSKNFSSKENESKVNTSTVEDKVLKKPDKIVQCPRCNSFDTKFCYFNNYNVSQPRHFCRSCHRYWTAGGTMRNVAVGAGRRKNKHIASQYRHMIVASDGIPNSSLESTTSDLSRYQNVSTIDSAAVFRCSNDNGIVLKFGLDNASLHESNGSMFNPKNRKRNVNASANNCRENGDEESSLCLSSVTNGYTRGNELSKFEHNRSKPLQSYPASSWMIPLNQSLNNVTSMVQSSMQMCNPYGIDPTSMQWCHTPMVVVTDISTPNIGLQFFPGSYKNGSVSIGSNGCISPSSSTNNSCCSGNGSPIIGEHTRDCVSIDETNFR* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g4081 369 MobiDBLite consensus disorder prediction 34 49 - -
Mal6g4081 369 ProSitePatterns Zinc finger Dof-type signature. 81 117 IPR003851 GO:0003677|GO:0006355
Mal6g4081 369 PANTHER CYCLIC DOF FACTOR 3-LIKE 31 363 - -
Mal6g4081 369 MobiDBLite consensus disorder prediction 34 68 - -
Mal6g4081 369 PANTHER CYCLIC DOF FACTOR 2 31 363 IPR045174 GO:0003700|GO:0006355
Mal6g4081 369 ProSiteProfiles Zinc finger Dof-type profile. 79 133 IPR003851 GO:0003677|GO:0006355
Mal6g4081 369 Pfam Dof domain, zinc finger 76 133 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g4081 Mal-Chr6 116406999 116408732 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g4081 45 145 C2C2-Dof Transcription Factor Family AT5G39660 62.745 6.58e-38 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Mal6g4081 zf-Dof 3.4e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g4081 - - mtr:MTR_6g027460 546.584
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g3234 3 108237589 108239918 Mal6g4081 6 116406999 116408732 PCT