Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g4080 ATGAATGGTGAAGGTGACATGTGTGTTAAAGATTCTACTATCTTGCTCTTTGGCAAGAAGATTCCGGTGCCGGAATGTCATATTCCGGTGCCGGAATTTCAGATTCAGGCCAACTCTTCAACCATGAATTCTTGCAGTAACTCAAAGCATAAAGGAATTGAAATGCCTCACACTCAAAACATTGAGAAACCAAAGAATTCTTCTAAGGAAGATGACAGCACAGATCAAGACAAAGTTCTAAAGAAACCAGACAAGATTCTTCAATGTGCAAGATGCAAAAGTTTCGACACGAAATTTTGTTATTTCAACAATTACAATGTCAATCAACCTCGACATTTTTGCAGGAACTGTCATAGATATTGGACAGCCGGCGGAACAATGAGAAATGTTCCAGTTGGTGCAGGGAGACGGAAGAACAAACACATAGCTTCTCAATATCGCCACATGATTGTAGCGTCCGATAGAATTTCAACCGCAAATTTAGAAATCAACGACTCTTCTAGGTATCAACATGTCTCAACTACCGAATCTGCTGCGGTTTTCAAGTGCTCAAATAATAATGGTATTGTCCTAAAATTCGGTCAAGACAATGCCGCCGCTCTCCATGAATCGAACGATTCAGTGTTTAAGCCTAACGTTGAGGCAAGTGGAAACAATTGTAAAGAAAATGGAGATGAAGAATCATCGTTATGTGTGTCTTCTGTGACAAACGGTTATACTCGAGGTAACGAGTTATCTGAATCAGAACAAACTCACCTCACACTCGCCACAACACATAATAGGTCAAAACCTATGCAGAATTACCCTGCACCTTCATGGATAATTCCATTGAATCAAGGTTGGAACAATGTAACTTCTACGGTTCAATCATCAATGCAGATGTGTAGTCCTTATGGCATTGATCCTAATGGAATGCAGTGGTGTCGCGCGCCGATGGTTGCGGTTACAAACATTTTCTCACCAAACATTGGTTTGCAATTTGTTCCTGGATCATACAGGAACGGAACACCTTTGTGTGGTGGTAGAAATGGAAATGTTTCAATAGGTTCAAATGGTTGTGTTTCCCCTTCTTCATCTACTACTAGTAACAGTTTTCACTAG 1101 0.4042 MNGEGDMCVKDSTILLFGKKIPVPECHIPVPEFQIQANSSTMNSCSNSKHKGIEMPHTQNIEKPKNSSKEDDSTDQDKVLKKPDKILQCARCKSFDTKFCYFNNYNVNQPRHFCRNCHRYWTAGGTMRNVPVGAGRRKNKHIASQYRHMIVASDRISTANLEINDSSRYQHVSTTESAAVFKCSNNNGIVLKFGQDNAAALHESNDSVFKPNVEASGNNCKENGDEESSLCVSSVTNGYTRGNELSESEQTHLTLATTHNRSKPMQNYPAPSWIIPLNQGWNNVTSTVQSSMQMCSPYGIDPNGMQWCRAPMVAVTNIFSPNIGLQFVPGSYRNGTPLCGGRNGNVSIGSNGCVSPSSSTTSNSFH* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g4080 366 PANTHER CYCLIC DOF FACTOR 2 9 356 IPR045174 GO:0003700|GO:0006355
Mal6g4080 366 MobiDBLite consensus disorder prediction 55 78 - -
Mal6g4080 366 Pfam Dof domain, zinc finger 84 141 IPR003851 GO:0003677|GO:0006355
Mal6g4080 366 PANTHER CYCLIC DOF FACTOR 3-LIKE 9 356 - -
Mal6g4080 366 ProSiteProfiles Zinc finger Dof-type profile. 87 141 IPR003851 GO:0003677|GO:0006355
Mal6g4080 366 MobiDBLite consensus disorder prediction 44 78 - -
Mal6g4080 366 ProSitePatterns Zinc finger Dof-type signature. 89 125 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g4080 Mal-Chr6 116399956 116402108 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g4080 7 162 C2C2-Dof Transcription Factor Family AT3G47500 44.385 1.37e-38 141
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Mal6g4080 zf-Dof 7e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g4080 - - mtr:MTR_6g027460 497.278