Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g3675 ATGTTGGCTACCACCATTGTTAGTATACCTTTATCATTTATTTGGGCATACTTAAAACCTATTTTGATAATTTTACGTCAAGACAAAACTATTGCAACACAAGCTCAAATATTTGCTCGTTACTCAATTCCAAGTCTTTCTGCCAATGGTCTTCTTAGATGCATTGTTAAATTCCTACAAACCCAAAACATAGTTTTGCCTATGGTTCTTGCTAATGGATTCACTAGCTTAATACATGTTTTTCTATGTTGGGCTTTGATTCTAAAATTTGGATATGGTATTAAAGGAGCTGCTATTGCAATTTGTATCTCAAATTGGCTTAATGTGGTAATATTGGTACTTTACATCAAATTCTCATCTTCATGTAAAAAGACTTGGGGAGGTTTATCAATGGAATCATTGCACAACATTCCTGAATTTCTCAAACTCGCTTTTCCTTCGGCAGTTATGGTTTGCTTAGAATCATGGACATTTCAAATAATGGTGCTCCTGTCTGGTGCTCTTCCCAATCCAAAATTGCAAACTTCAGTCCTTAATACGTGTATTATTGTATCTGGTATGCTTTGGATGGTACCATTTGGAATTAGTGTTACTGCAAGTACAAGAATCTCAAATGAACTAGGAGCTGGAAGTCCAAAAGCTGCATATTTAGCTGTTATAGTAACTTTATTCATGGCATTCATTTGTGGAGTTCTAGAGTTTGCTTTCATGATGTCACTATGGAAAGTTTGGGGAAAAGCTTTTAGCAATGTACAAGAAGTAGTCACATATGCGACTTCAATGACACCGGTTGTTGCAATCTCTGCCTTTGTAGATTCATTTCAAACTCCACTCCAAGGTGTTGCTAGAGGATGTGGTTGGCAGAAGCTTGGTGCATTTATTAATCTAGGATCTTATTATTTGGTGGGCATTCCTTTTTCAGTTGTATTGGCTTTTGTCTTCCACATGAAGGGACAGGGGTTATATTTAGGACTTATAATAGCACTTCTTGTGCAAGTGGTGTGTTATCTTGTTGTCACCTTGTGCACCAATTGGGAGAAACAAGCAAATAATGCTGCAAAAAGAGTAGGAGGCAATGAAGTCCAAGTTAATGCACTTCAACATGACCAAAATGTTGTTACTCCATAG 1128 0.3679 MLATTIVSIPLSFIWAYLKPILIILRQDKTIATQAQIFARYSIPSLSANGLLRCIVKFLQTQNIVLPMVLANGFTSLIHVFLCWALILKFGYGIKGAAIAICISNWLNVVILVLYIKFSSSCKKTWGGLSMESLHNIPEFLKLAFPSAVMVCLESWTFQIMVLLSGALPNPKLQTSVLNTCIIVSGMLWMVPFGISVTASTRISNELGAGSPKAAYLAVIVTLFMAFICGVLEFAFMMSLWKVWGKAFSNVQEVVTYATSMTPVVAISAFVDSFQTPLQGVARGCGWQKLGAFINLGSYYLVGIPFSVVLAFVFHMKGQGLYLGLIIALLVQVVCYLVVTLCTNWEKQANNAAKRVGGNEVQVNALQHDQNVVTP* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g3675 375 Pfam MatE 2 84 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Mal6g3675 375 Pfam MatE 146 308 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Mal6g3675 375 PANTHER PROTEIN DETOXIFICATION 1 356 - -
Mal6g3675 375 PANTHER MULTIDRUG RESISTANCE PROTEIN 1 356 - -
Mal6g3675 375 CDD MATE_eukaryotic 5 349 IPR045069 GO:0042910|GO:1990961
Mal6g3675 375 TIGRFAM matE: MATE efflux family protein 2 321 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g3675 Mal-Chr6 107339928 107343643 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g0431 1 5025702 5034282 Mal6g3675 6 107339928 107343643 ECH
Mal6g3675 6 107339928 107343643 Mal6g3675 6 107339928 107343643 ECH