Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g2125 ATGATTAATAATTCAACCATAAAGCTTTTTGGGAGAACGATTTTTCAAACACACAACACCGATGTCTCTACAAATGATTCTTCCTCAGAGTTAGAACATGATTCTCATCTTCCTCATGAAGATTTCTCTGATCATAGTCCTTATTCATCTTCATGTTCACCACTTGAAGTGAATTCTCCAACTGAACATGATGCAAAGAGATATAAGGAAACATCAAGGAAAGATGAGGCCTCACTCGAAACTACAGAGGGTTCAAAATCTCAAACATCTTCAAGCCTTGTTGAGAACCCGAAAACTCCCTCATCTGAAACAGAAACTTCTGAATTGAATTCCACTAAAATTGATGAACAAATTGATATGTCACAAGACAAATCTCCCAAGAAACCAGACCAAATTGTTCCATGCCCAAGATGCAAAAGCATGGACACAAAATTTTGCTACTACAACAATTACAATGTCAAACAACCCCGTCACTTCTGCAAAAACTGCCAGAGGTATTGGACTTTCGGCGGAACCACGAGAAATATGATTGTAGGTGCAGGTCGCCGCAAAAACAAACTCAATGCAACCAATGGATTGCATAATACTACTGTCTTGACCTTTGGATCAGATTCTTCTATTATGTCTTCAACTAATTCACTCGACCAAAAAAAGAATGTTGGATCACATGAAGAAACAACTGATAAGAGTTATCAAAGTTTTCATCCTCCACAGTTTCCATGGAACCCTGCAATGTGTTATCCTGTGTCATTCTGTCCCAATATAGCATACTATGGAGGTTGTTTGGTACCATCATGGAATGTACAATCAATCCCAACACAATCATGTGGTCAAAATTCAACTACTTTAGGGAAACATTCAAGAGATGGGAACATTCCTTTTCATTCCAACTCAGAGAAAGAAAAACTTGGCTCAGAAAGTAATAATAATAGTGTGTTGATCCCCAAGACACTGAGAATTGATGACCCTAATGAAATTGCAAAGAGTTCTATATGGTCAACATTAGGAATCAAGAATGGTGGAGAGCTTTTCATGGGATTTGCATCTAAGGGGGGAGTCAAGAATCATGTTGAAACATCGTCGTCAGTTTTGCAAGCTAATCCTGTAGCTTTATCAAGGTCTCTTGTGTTCCATGAGAGGATTTGA 1146 0.3822 MINNSTIKLFGRTIFQTHNTDVSTNDSSSELEHDSHLPHEDFSDHSPYSSSCSPLEVNSPTEHDAKRYKETSRKDEASLETTEGSKSQTSSSLVENPKTPSSETETSELNSTKIDEQIDMSQDKSPKKPDQIVPCPRCKSMDTKFCYYNNYNVKQPRHFCKNCQRYWTFGGTTRNMIVGAGRRKNKLNATNGLHNTTVLTFGSDSSIMSSTNSLDQKKNVGSHEETTDKSYQSFHPPQFPWNPAMCYPVSFCPNIAYYGGCLVPSWNVQSIPTQSCGQNSTTLGKHSRDGNIPFHSNSEKEKLGSESNNNSVLIPKTLRIDDPNEIAKSSIWSTLGIKNGGELFMGFASKGGVKNHVETSSSVLQANPVALSRSLVFHERI* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g2125 381 MobiDBLite consensus disorder prediction 60 81 - -
Mal6g2125 381 ProSitePatterns Zinc finger Dof-type signature. 135 171 IPR003851 GO:0003677|GO:0006355
Mal6g2125 381 PANTHER CYCLIC DOF FACTOR 1 2 198 - -
Mal6g2125 381 PANTHER CYCLIC DOF FACTOR 1 209 380 - -
Mal6g2125 381 MobiDBLite consensus disorder prediction 109 126 - -
Mal6g2125 381 MobiDBLite consensus disorder prediction 27 43 - -
Mal6g2125 381 MobiDBLite consensus disorder prediction 19 131 - -
Mal6g2125 381 MobiDBLite consensus disorder prediction 210 231 - -
Mal6g2125 381 ProSiteProfiles Zinc finger Dof-type profile. 133 187 IPR003851 GO:0003677|GO:0006355
Mal6g2125 381 MobiDBLite consensus disorder prediction 44 58 - -
Mal6g2125 381 MobiDBLite consensus disorder prediction 82 108 - -
Mal6g2125 381 MobiDBLite consensus disorder prediction 275 308 - -
Mal6g2125 381 Pfam Dof domain, zinc finger 130 186 IPR003851 GO:0003677|GO:0006355
Mal6g2125 381 PANTHER CYCLIC DOF FACTOR 2 2 198 IPR045174 GO:0003700|GO:0006355
Mal6g2125 381 PANTHER CYCLIC DOF FACTOR 2 209 380 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g2125 Mal-Chr6 49294792 49296767 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g2125 101 381 C2C2-Dof Transcription Factor Family AT5G62430 46.179 3.62e-68 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Mal6g2125 zf-Dof 1.2e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g2125 - - mtr:MTR_5g041530 638.647