Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g2057 ATGGTGAAGATTTGCTGCATTGGAGCTGGCTATGTTGGTGGTCCAACAATGGCTGTGATTGCTTTGAAGTGTCCTGAGGTTGAGGTAGCGGTTGTGGATATTGCCACGGCGCGAATCAATGCTTGGAACAGTGACCACCTACCGATATATGAGCCTGGTCTTGATGATGTGGTGAAGGAGTGCAGAGGAAGGAACCTTTTCTTCAGCACTGATGTTGAGAAACATGTTGCCGAGGCTGATATCGTGTTTGTTTCGGTGAACACTCCGACGAAGACTCAGGGTCTTGGAGCTGGTAAAGCAGCTGATCTCACTTACTGGGAGAGTGCTGCTAGGATGATTGCTGATGTTTCGAAATCGGACAAAATTGTCGTTGAGAAATCGACTGTTCCGGTTAAAACGGCCGAGGCAATCGAGAGGATTTTGACTCACAACAGGAAAGGGATTAATTTCACTATTTTGTCTAACCCTGAGTTTCTTGCTGAGGGTACAGCTATCAAAGATCTGTTCAATCCGGATCGTGTGCTTATTGGAGGTCGGGAAACCCCTGAAGGTCAAAAGGCTATTCATGCTTTGAGAGATGTTTATGCTCATTGGGTGCCGTCGGATCGAATCCTTTGCACCAATTTGTGGTCTGCTGAACTCTCAAAGCTCGCTGCCAATGCTTTCTTGGCGCAGAGGATCTCCTCTGTGAATGCCATGTCAGCTCTATGTGAGGCAACCGGTGCTGATGTTTCCCAGGTTTCCCACTCAATCGGCACTGACTCAAGAATTGGACCAAAGTTCTTGAATGCTAGTGTTGGTTTTGGTGGATCTTGCTTTCAGAAGGATATTCTGAACTTGGTCTATATCTGCGAGTGCAACGGCCTTCCCGAGGTGGCTAACTACTGGAAACAGGTCATTAAGGTGAATGACTACCAGAAATCTCGGTTCGTGAACCGAATTGTTTCTTCGATGTTCAACACCGTGTCAGGAAAAAAGATCGCTGTTTTGGGATTTGCTTTCAAGAAGGACACCGGCGACACTAGAGAGACTCCTGCAATCGATGTGTGCAAGGGTTTATTGGGAGACAAGGCTAAGTTGAGCATATATGATCCTCAGGTTTCTGAAGAACAAATCTTAAAGGATTTAGCAATGAAGAAATTTGATTGGGATCATCCTGCTCATCTTCAACCAACAAGTCCAACAACTTCCACCAACAAGCAAGTATCTGTTGTTTGGGACGCGTACGAGGCCATAAAGGATTCACATGGTGTTTGCATTCTGACTGAGTGGGATGAGTTCAAGAACCTTGATTACCAAAAAGTTTTCAACAACATGCAGAAGCCTGCATTTATCTTTGATGGAAGAAATGTTGTGGATGTGAAAAAGCTGAGGGAAATTGGTTTTATTGTTTATTCCATTGGAAAACCACTAGATGCTTGGCTCAAGGACATGCCTGCAGTGGCTTAA 1449 0.4527 MVKICCIGAGYVGGPTMAVIALKCPEVEVAVVDIATARINAWNSDHLPIYEPGLDDVVKECRGRNLFFSTDVEKHVAEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIERILTHNRKGINFTILSNPEFLAEGTAIKDLFNPDRVLIGGRETPEGQKAIHALRDVYAHWVPSDRILCTNLWSAELSKLAANAFLAQRISSVNAMSALCEATGADVSQVSHSIGTDSRIGPKFLNASVGFGGSCFQKDILNLVYICECNGLPEVANYWKQVIKVNDYQKSRFVNRIVSSMFNTVSGKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVSEEQILKDLAMKKFDWDHPAHLQPTSPTTSTNKQVSVVWDAYEAIKDSHGVCILTEWDEFKNLDYQKVFNNMQKPAFIFDGRNVVDVKKLREIGFIVYSIGKPLDAWLKDMPAVA* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g2057 482 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 210 309 IPR008927 -
Mal6g2057 482 Gene3D - 241 480 - -
Mal6g2057 482 SUPERFAMILY UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 315 465 IPR036220 -
Mal6g2057 482 Pfam UDP-glucose/GDP-mannose dehydrogenase family, central domain 210 304 IPR014026 GO:0016616|GO:0051287
Mal6g2057 482 Pfam UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 328 453 IPR014027 GO:0016616|GO:0051287
Mal6g2057 482 TIGRFAM NDP-sugDHase: nucleotide sugar dehydrogenase 3 450 IPR017476 GO:0016616
Mal6g2057 482 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 3 201 IPR036291 -
Mal6g2057 482 PIRSF UDPglc_DH_euk 1 482 IPR028356 GO:0003979
Mal6g2057 482 Gene3D - 1 208 - -
Mal6g2057 482 Pfam UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 3 186 IPR001732 GO:0016616|GO:0051287
Mal6g2057 482 Gene3D - 209 240 - -
Mal6g2057 482 PANTHER UDP-GLUCOSE 6-DEHYDROGENASE 1 1 482 - -
Mal6g2057 482 SMART UDPG_MGDP_dh_C_a_2_a 328 454 IPR014027 GO:0016616|GO:0051287
Mal6g2057 482 PANTHER UDP-GLUCOSE DEHYDROGENASE/UDP-MANNAC DEHYDROGENASE 1 482 IPR028356 GO:0003979
Mal6g2057 482 PIRSF UDPglc_GDPman_dh 2 469 IPR017476 GO:0016616
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g2057 Mal-Chr6 47196666 47198114 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g2057 6 47196666 47198114 Mal6g2057 6 47196666 47198114 ECH
Mal6g2057 6 47196666 47198114 Mal3g0293 3 9978450 9979892 ECH
Mal7g3203 7 95992794 95994320 Mal6g2057 6 47196666 47198114 PCT