Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0014 ATGTCACCAAATGAAACACAAACCTCAAAATCTCCAAAAGACAACAACAACAACATCAACCAACAAGGTTCTGGTGGTAAGAAAACATCTTCATCATCTTCAACCTCAACAACAAAACCACCAGAACAGAACATGAAGTGTCCTAGATGTGACTCACCCAACACAAAATTCTGCTACTACAACAACTACAGCTTAACACAACCAAGACATTTCTGCAAAACATGTAGAAGATATTGGACAAAAGGTGGAGCTTTACGCAACGTTCCAATCGGTGGTGGATGTAGAAAAAACAAGAAAATGAAATCATCATCATCATCAAGACTCTCTTGTGATTCAAAAGACTCTGCTTCTTCTTCTTCAGAGCTTGTTGGTGGCTTAAAATTCCTTCATTCTCTTTCTTCTCCTTCCATGGATTTTCATCTTGGTAATGGTTTACCTTTTCCAAGGCTTCAACTTCAACAAAACCATCATTCTCTTTCTCCAATATTTAACCAGTTTTCATCTTTTGGAGAAACTTCTTCTGCTATGAATTACCCTGCTTCCTCAAATTCTGTTCCTGCTATGAACTACCCTTTTTCAACAGGTAATTATAATGGTGCAATTCAAGGTATGAGTTCAATGAATATTCATAGCAACGTTGCTTCTTCTATTGAGTCATTGAGTTCTATGAACCAAGACTTGCACTGGAAGCTACAGCAACAAAGATTATCTATGCTTTTTGGTGGTGGAGAAAATCAGAAAGATAATAATAATCTTCAGAATCAGACAGAGAAGCCACTACAACCTATTTTGTTTCAGAATCTTGAAGTTGCAAAACCAGATGATAGGGGTTTTTCTGTTGGAAATTCAAGAAGAGGAGAAGGTACAAATGGTGGTGGAGATGCAGCAACAGAGTGGTTTTTTGGAAATTCTTATGGTTCTGCTGCTGCTACACCTACTGCAAGTGGTGGAGCTGGACATGAAAATGGAAGCAACTGGAATGGTGGTGGTGGTGTTCATGGTTGGAGTGATGTGCAGCAGCAATATAGTGCTTTGCCCTAG 1041 0.3881 MSPNETQTSKSPKDNNNNINQQGSGGKKTSSSSSTSTTKPPEQNMKCPRCDSPNTKFCYYNNYSLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKKMKSSSSSRLSCDSKDSASSSSELVGGLKFLHSLSSPSMDFHLGNGLPFPRLQLQQNHHSLSPIFNQFSSFGETSSAMNYPASSNSVPAMNYPFSTGNYNGAIQGMSSMNIHSNVASSIESLSSMNQDLHWKLQQQRLSMLFGGGENQKDNNNLQNQTEKPLQPILFQNLEVAKPDDRGFSVGNSRRGEGTNGGGDAATEWFFGNSYGSAAATPTASGGAGHENGSNWNGGGGVHGWSDVQQQYSALP* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0014 346 ProSiteProfiles Zinc finger Dof-type profile. 45 99 IPR003851 GO:0003677|GO:0006355
Mal6g0014 346 MobiDBLite consensus disorder prediction 310 335 - -
Mal6g0014 346 MobiDBLite consensus disorder prediction 1 47 - -
Mal6g0014 346 ProSitePatterns Zinc finger Dof-type signature. 47 83 IPR003851 GO:0003677|GO:0006355
Mal6g0014 346 MobiDBLite consensus disorder prediction 1 43 - -
Mal6g0014 346 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 21 346 IPR045174 GO:0003700|GO:0006355
Mal6g0014 346 PANTHER DOF-TYPE ZINC FINGER DNA-BINDING FAMILY PROTEIN-RELATED 21 346 - -
Mal6g0014 346 MobiDBLite consensus disorder prediction 274 295 - -
Mal6g0014 346 MobiDBLite consensus disorder prediction 90 119 - -
Mal6g0014 346 Pfam Dof domain, zinc finger 43 99 IPR003851 GO:0003677|GO:0006355
Mal6g0014 346 MobiDBLite consensus disorder prediction 103 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g0014 Mal-Chr6 209438 210478 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g0014 32 346 C2C2-Dof Transcription Factor Family AT5G65590 43.202 2.12e-63 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Mal6g0014 zf-Dof 1.6e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0014 - - gmx:100780729 373.244
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g0014 6 209438 210478 Mal5g2953 5 87508412 87509440 PCT