Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4363 ATGCAGGAGATACATTCCATCGGTGGCGCCGGAGGAACCAGATTCTTCGGCGGCGGTGGAGGTGACCGGAGACTCAGACCCAACCAAAACAACAACCTGAACCAAGAAGCCATGAAATGTCCTCGTTGCGATTCCATCAACACCAAATTCTGTTATTACAATAACTACAACCTCTCTCAGCCTCGTTACTTTTGCAAAAACTGCCGTCGTTATTGGACTAAAGGCGGTGTCCTCCGTAACGTCCCCGTCGGCGGAGGTTGCCGTAAATCCAAACGCTCTAACAAACCAAAAAACTCAGCCTCTTCTGATTCCACCGTTTTACCGACAACTCCACCAGATGCGCCGGAGAACAAGTCAAACTCTCACTCTAGCAGTGAAGGTTCTAGCCTCACCGCCGCGGCGGTGACGGAGGCGGTTTCAGAACCAACGCCACCGCTGAACAAGAATATCAACACTGTTCTGGAGAATGATTCACTTGAACAAGGAAATGGAGATTGCGGTATATTCTCAGAGATCGCAACTTTCACAAGCTTGATCACTTCCTCTAACGAGGCATTGCCGTTTGTATTCGGTAACGGTAACTGTAACGTTACCGGTGACGGTAGCGGTAACGGATTCACTGACGCGTCATCGTTTCAGTGGCAAAACCAGAAGTTGATGACTGTTACCGGAGATCAAAAACATCATGAAGAAGACGCATTGAAGTTGTTACCGGAGAATATCGGTGCTGGTGAGGGTGGTTCTTCTGGTTCTGGATCGTTGCTGGACCATGGTATTGATTTCTCTTTGCTGAAGAATGAAACAAACAACGGTGGATTTGGATCGTTGGATTGGAATGGTGATGGTGGTGCAGATCATCAAGGTTTGTTTGATCTTCCTAACACCGTTGATCAAGGTTACTGGAATCATACTCACTGGTCTGATCAGGATCATTCTTCACTCTTTCATCTTCCATAA 957 0.4744 MQEIHSIGGAGGTRFFGGGGGDRRLRPNQNNNLNQEAMKCPRCDSINTKFCYYNNYNLSQPRYFCKNCRRYWTKGGVLRNVPVGGGCRKSKRSNKPKNSASSDSTVLPTTPPDAPENKSNSHSSSEGSSLTAAAVTEAVSEPTPPLNKNINTVLENDSLEQGNGDCGIFSEIATFTSLITSSNEALPFVFGNGNCNVTGDGSGNGFTDASSFQWQNQKLMTVTGDQKHHEEDALKLLPENIGAGEGGSSGSGSLLDHGIDFSLLKNETNNGGFGSLDWNGDGGADHQGLFDLPNTVDQGYWNHTHWSDQDHSSLFHLP* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4363 318 ProSitePatterns Zinc finger Dof-type signature. 40 76 IPR003851 GO:0003677|GO:0006355
Mal5g4363 318 Pfam Dof domain, zinc finger 36 92 IPR003851 GO:0003677|GO:0006355
Mal5g4363 318 PANTHER DOF ZINC FINGER PROTEIN DOF5.4 8 222 - -
Mal5g4363 318 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 8 222 IPR045174 GO:0003700|GO:0006355
Mal5g4363 318 MobiDBLite consensus disorder prediction 83 150 - -
Mal5g4363 318 MobiDBLite consensus disorder prediction 1 33 - -
Mal5g4363 318 ProSiteProfiles Zinc finger Dof-type profile. 38 92 IPR003851 GO:0003677|GO:0006355
Mal5g4363 318 MobiDBLite consensus disorder prediction 97 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g4363 Mal-Chr5 114954339 114955295 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g4363 22 318 C2C2-Dof Transcription Factor Family AT5G60850 41.250 9.84e-53 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Mal5g4363 zf-Dof 2.7e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g4363 - - mtr:MTR_4g109980 505.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g4363 5 114954339 114955295 Mal5g4363 5 114954339 114955295 ECH