Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3633 ATGGCATCAATTACCATAACCTCCTTGCTCTTCTTTTCCTTGATCACTTTGTCATTGGCAATGGACATGTCCATGCGTACTAACAAGGAGGTTATGACCATGTACGAGGAATGGTTGGTAAAACACCAAAAGGTGTATAATGGATTAGGAGAGAAAGACAAAAGGTTTGAAATTTTTAAGGATAATTTAGAATTCATCGATGAGCACAATGCTCAAAATTACTCTTACAAAGTAGGGTTGAACAAGTTTGCTGATATGACTAATGAGGAATATCGCGACATGTATTTAGGCACGAGGAGTGATGCCAAACGTAGGGTTATGAAAACCAAGATCACCACCGGTCATCGGTATACTTATAATTCCGGTGATCGGTTGCCGGTGCATGTTGATTGGAGGTCCAAAGGTGCAGTTACTCATATCAAAGATCAAGGAAGTTGTGGAAGTTGTTGGGCATTCTCAACAATAGCCACAGTGGAAGCTATAAACAAGATAGTCACAGGGAAGCTTGTGTCTTTGTCAGAACAAGAGCTTGTGGACTGTGACAGAGCCTTCAATGAAGGGTGCAATGGTGGTCTCATGGACTATGCCTTTGAATTCATCATTGGAAATGGTGGCATAGACACTGACCAAGACTATCCATACAAGGGATTTGAGGGTAGATGTGATCCAACTAGGAAAAATGCCAAGGTAGTGAGCATTGATGGATATGAAGATGTTCCAGCATATAATGAAAATGCATTAAAGAAAGCTGTGGCTCATCAACCTGTGAGCGTTGCTATTGAGGCTTCTGGCAGGGCTTTGCAACTCTATGAATCGGGTGTATTTACTGGTAGATGTGGGACAAACTTGGACCATGGTGTGGTTGCTGTTGGATATGGTTCTGAAAATGGTGTTGATTATTGGTTGGTGAGGAACTCATGGGGCAGTAACTGGGGTGAAGATGGTTACTTCAAGTTAGAACGTAATGTGAAAAAGACCAATACTGGAAAGTGTGGAATTGCAATGGAAGCCTCATACCCAGTGAAGTATGGTCAAAACTCTGCTAATTCAGCTTATGAAAACAATGAAGTGCTTGTTAGCAGTGCTTGA 1089 0.4169 MASITITSLLFFSLITLSLAMDMSMRTNKEVMTMYEEWLVKHQKVYNGLGEKDKRFEIFKDNLEFIDEHNAQNYSYKVGLNKFADMTNEEYRDMYLGTRSDAKRRVMKTKITTGHRYTYNSGDRLPVHVDWRSKGAVTHIKDQGSCGSCWAFSTIATVEAINKIVTGKLVSLSEQELVDCDRAFNEGCNGGLMDYAFEFIIGNGGIDTDQDYPYKGFEGRCDPTRKNAKVVSIDGYEDVPAYNENALKKAVAHQPVSVAIEASGRALQLYESGVFTGRCGTNLDHGVVAVGYGSENGVDYWLVRNSWGSNWGEDGYFKLERNVKKTNTGKCGIAMEASYPVKYGQNSANSAYENNEVLVSSA* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3633 362 SMART Inhibitor_I29_2 35 91 IPR013201 -
Mal5g3633 362 SMART pept_c1 125 341 IPR000668 GO:0006508|GO:0008234
Mal5g3633 362 Pfam Cathepsin propeptide inhibitor domain (I29) 35 91 IPR013201 -
Mal5g3633 362 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 143 154 IPR000169 -
Mal5g3633 362 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 300 319 IPR025661 -
Mal5g3633 362 Pfam Papain family cysteine protease 125 341 IPR000668 GO:0006508|GO:0008234
Mal5g3633 362 Gene3D Cysteine proteinases 16 343 - -
Mal5g3633 362 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 283 293 IPR025660 -
Mal5g3633 362 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 19 349 - -
Mal5g3633 362 Coils Coil 352 362 - -
Mal5g3633 362 CDD Peptidase_C1A 126 340 IPR039417 -
Mal5g3633 362 SUPERFAMILY Cysteine proteinases 27 341 IPR038765 -
Mal5g3633 362 PRINTS Papain cysteine protease (C1) family signature 300 306 IPR000668 GO:0006508|GO:0008234
Mal5g3633 362 PRINTS Papain cysteine protease (C1) family signature 285 295 IPR000668 GO:0006508|GO:0008234
Mal5g3633 362 PRINTS Papain cysteine protease (C1) family signature 143 158 IPR000668 GO:0006508|GO:0008234
Mal5g3633 362 PANTHER CYSTEINE PROTEASE 19 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3633 Mal-Chr5 103132775 103136496 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g5735 1 134204098 134208554 Mal5g3633 5 103132775 103136496 ECH
Mal2g1180 2 13820130 13826713 Mal5g3633 5 103132775 103136496 ECH
Mal5g3633 5 103132775 103136496 Mal5g3633 5 103132775 103136496 ECH