Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3537 ATGCCTTCTTCGGACTCCGGTGAAAGCCGCCGATCAACCAAACCACAGAACCGCCCCGGCGCACCTGCGCCGGAGCAAGAGAATCTTCCATGTCCTCGTTGTGATTCAACCAACACCAAATTCTGTTACTACAACAACTACAACTACTCTCAGCCACGTCATTTCTGCAAAGCTTGCCGCCGTTACTGGACTCAGGGTGGAACCCTCCGTGACATCCCTGTTGGCGGTGGTACTCGAAAAAACGCCAAACGCTCCCGTACTCAGCATGTTGCGGTTACTTCCTCATCTTCTTCCTCTGCAGTGAATTCTGCACCGGAGCACCATCACTATCAAACAATGACACCCATCTCCGCCGTGCAAGGAGGAGGGTCTTTTCCGTTCGGTGGTGGTGTTGACGGTGATGGAAAACAGAATATGAGTGTTTGTGGGAGTTTCACTTCGTTGCTGAACAACAACAACAACAACCAAGGCTCTGGCTTTTTAGCTCTTGGTGGATTTGGGCTTGGGCTTGAAGAAATGGGCTTTGGGATTGGGAGAACTGGTTGGGCTTTTCCAGGAATGGTGGATGGATCCAATATTGGTGTACCTGTTGTCTCTTCTGGTGTTGGAAACACGTGGCAGTTCGAAGGTGGTGAAGGTGGTTTTGTTGGAGCTAATGATTGTTTCTCTTGGCCTGGACTTGCAATTTCAACACCTGGAAATGGTTTCAAATGA 714 0.4986 MPSSDSGESRRSTKPQNRPGAPAPEQENLPCPRCDSTNTKFCYYNNYNYSQPRHFCKACRRYWTQGGTLRDIPVGGGTRKNAKRSRTQHVAVTSSSSSSAVNSAPEHHHYQTMTPISAVQGGGSFPFGGGVDGDGKQNMSVCGSFTSLLNNNNNNQGSGFLALGGFGLGLEEMGFGIGRTGWAFPGMVDGSNIGVPVVSSGVGNTWQFEGGEGGFVGANDCFSWPGLAISTPGNGFK* 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3537 237 Pfam Dof domain, zinc finger 27 83 IPR003851 GO:0003677|GO:0006355
Mal5g3537 237 PANTHER DOF ZINC FINGER PROTEIN DOF3.4 1 234 - -
Mal5g3537 237 MobiDBLite consensus disorder prediction 1 30 - -
Mal5g3537 237 MobiDBLite consensus disorder prediction 73 109 - -
Mal5g3537 237 ProSitePatterns Zinc finger Dof-type signature. 31 67 IPR003851 GO:0003677|GO:0006355
Mal5g3537 237 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 1 234 IPR045174 GO:0003700|GO:0006355
Mal5g3537 237 MobiDBLite consensus disorder prediction 1 16 - -
Mal5g3537 237 ProSiteProfiles Zinc finger Dof-type profile. 29 83 IPR003851 GO:0003677|GO:0006355
Mal5g3537 237 MobiDBLite consensus disorder prediction 87 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3537 Mal-Chr5 101174873 101175586 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g3537 1 237 C2C2-Dof Transcription Factor Family AT3G50410 45.802 4.80e-59 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Mal5g3537 zf-Dof 1.1e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3537 - - cam:101488684 374.785