Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g2289 ATGATGGCTTTCTTCTTTTTCTCTCTTCTTTTGCTCCTTCCTCTTTGCTTTTTTTCACTTACTCTCGGAGCCACTCTACAAGAAGATGAAGTGGAAGCTCTGAAAGATATAGGTAAAAGACTTGGGAAGAAGGATTGGGACTTCAATGTAGATCCATGTAGTGGAGGGAATAACTGGATATCTTCTACTCAATTACATGGTTCTGAAAATGCTGTTACCTGCAATTGCTCTTTTCAAAATAACACTCTCTGTCATGTTGTTAGCGTTGTTCTAAAAGCACAAAACCTTTCCGGTACTCTTCCACCTGATCTTGTGAGGTTGCCTTTTCTCCAAGAAATTGACCTAACCCTCAACTATCTTAATGGTACAATTCCCAAACAATGGGCCACATTAAAACTTGTAAACATTTCTTTCTATGGAAATCGTCTATCTGGTCCAATTCCAAAGGAGTTTGGAAACATCACCACTCTCAAAAGCTTGGTATTGGAGTTCAACCAATTATCAGGAAATCTTCCCCCAGAACTTGGGAGTCTTTACCAGATTGAAAGACTGCTTCTTTCGTCCAACAACTTCACCGGAGTGTTACCTGCAACATTTGTCAAGCTCACTGCATTGAAGCAATTTCGAATTGGTGATAGTCAATTCTCTGGAGCAATACCCAACTTTATACAGAGCTGGACAAATCTTGAGATGCTCACAATCCAAGGGAGTGGTTTGAGTGGGCCAATTCCTTCTGGAGTTTCACTTTTGAAGAACCTCACTGACTTGACTATTACTGACTTGAATGGATCTGATTCACCTTTTCCACAACTTCAAAACATGTCAAAGCTGTCAAAATTAGTATTGAGAAGTTGCAATATCACTGGAGCACTGCCTGAATATCTTGGAAAGTTAACTAATCTGAAAGTGATAGACCTCAGCAACAACAAATTAAGTGGACAAATCCCCATGAGCTTCGATGGTCTACAGAACATGTATTTGCTACTTTTATCTGGGAATCAGTTGTCTGGATCGCTGCCAGACTGGATAGCTAAACCAGACTTTGTAGACCTGTCATATAACAACTTCACTATAACAAACTTTGAGCAGCAGACTTGTCAACAAGGAAGTGTGAACTTGTTTGCATCTTCTTTGGCGGGAAACAGCTTAGGAAATATTTCATGTATGGAAAATTATCACTGTCCTAAAACTTGGTACTCTCTCGATATAAATTGTGGTGGAAAGAGCATAACAGTTGATGGAAATAAAACATATGATGATGATTCAAATGAGATGGGACCAGCAAGGTATCGTCAAATTGGACCAAACTGGGCACTTATAACTGCTGGTCACTTCTTTGATAGTGGACGCCCTGACTACTACATATGGTCTAATGCAACAAAGCTTGCTGTCAAAGATGATCCTGAACTGTACATGGATGCACGTGTTTCTCCAAATTCTCTTACTTATTATGGATTCTGCCTTGGAAATGGAAACTACACTGTGAATCTCCATTTTGCAGAAATAATGTTCACTGATGACAAAACATATAGCAGCATTGGAAGACGTGTATTTGACATCTACATCCAGAGAAAGTTGGTGGCAAAGGATTTCGATATTGTAAAAAAGGCAGGGGGTGTTGGTAAGGCAGTCATTGAAAATTTTACTGCTAGTGTGACCGGTAGTGCGTTGGAGATTCGCTTATATTGGGCTGGGAAAGGCACAACTACTATCCCATTTGGATCAGTATATGGTCCTATTATATCAGCTATATCAGTTAATTCTGATTTTACACCCCCATCAGAAAATAGTAGAAGCATACCTTCAGGGGCTGTTGCTGCAATTGTGGTTGCAGGAGCAATTGTTATCATCTTGGTAATTGGCATAATGTGGTGGAAGGGCTGTTTCAGACTGAAATATTTAGGGTCAAGAGAGCGAAGGGGTCTTGCTTCACAAACTGGCTTATTCACCCTACGGCAAATCAAAGCAGCAACAAACAACTTTGATGAATCCTTCAAGATTGGAGAAGGAGGATTTGGTCCAGTTTACAAGGGCGTTCTATTAGATGGCACAATAGTAGCGATTAAGCAGCTATCTTCTAAATCAACACAAGGATCTCGTGAATTTATTAATGAGATTGGCATGATTTCTACTTTACAACACCCTAATCTTGTTAAGCTCTATGGCTTCTGTATGGAAGATGATCAGTTGTTGTTGATATATGAATACATGGAAAACAATAGCCTTGCTCATGCTCTATTTGCCAAAAAAGAAGACCTAGAAAATCGTCAATTGAGATTGGATTGGAAAACAAGGAAGAGGATTTGTATTGGTATTGCTAAAGGTTTAGCTTACCTTCATGGAGAGTCAAAAATAAAGATCATTCATAGGGACATCAAGGCCACTAATGTGTTGCTAGATAAAGACCTCAACCCCAAGATATCTGATTTTGGTTTGGCAAAGCTCAATGAAGACGACAAAACCCACATGAACACCAGAATAGCTGGCACTTATGGATACATGGCTCCTGAGTATGCTATGCATGGTTATTTGACAGACAAAGCAGATGTTTATAGTTTTGGAATTGTTGTATTGGAAATTGTTAGCGGAAACAACAACACTGTTAGCCATCCTCAGGAGGAATGCTTCTCTCTTCTCGATTGGGCGCGCCTCTTGAAGGAAAAAGATAATCTAATGGAGCTTGTTGATCGGAGGTTGGGCGAAGACTTCAAGAAAGAGGAGGTAACGATGATGATCAATGTTGGTCTTTTATGCACCAGTTTTTCTCCATCGCTCAGGCCCTCCATGTCTTCGGTTGTAAGCATGCTTGAAGGAAGAACAAATGTTCAAGAAGTGGTGGCAGAATCAACTGAGGTATTGGATGATAAGAAATATAAGGTGATGCAACAATACTACAAACATAGAGGAGAAAATAGCGCAAGTGAGGCCGGAAGCCAAAGCATAGCAACAGATGAATCGAATGCCTTTATATATGATACAGATTCTTCATACTGGGAACCAAGAAATTAG 3009 0.3988 MMAFFFFSLLLLLPLCFFSLTLGATLQEDEVEALKDIGKRLGKKDWDFNVDPCSGGNNWISSTQLHGSENAVTCNCSFQNNTLCHVVSVVLKAQNLSGTLPPDLVRLPFLQEIDLTLNYLNGTIPKQWATLKLVNISFYGNRLSGPIPKEFGNITTLKSLVLEFNQLSGNLPPELGSLYQIERLLLSSNNFTGVLPATFVKLTALKQFRIGDSQFSGAIPNFIQSWTNLEMLTIQGSGLSGPIPSGVSLLKNLTDLTITDLNGSDSPFPQLQNMSKLSKLVLRSCNITGALPEYLGKLTNLKVIDLSNNKLSGQIPMSFDGLQNMYLLLLSGNQLSGSLPDWIAKPDFVDLSYNNFTITNFEQQTCQQGSVNLFASSLAGNSLGNISCMENYHCPKTWYSLDINCGGKSITVDGNKTYDDDSNEMGPARYRQIGPNWALITAGHFFDSGRPDYYIWSNATKLAVKDDPELYMDARVSPNSLTYYGFCLGNGNYTVNLHFAEIMFTDDKTYSSIGRRVFDIYIQRKLVAKDFDIVKKAGGVGKAVIENFTASVTGSALEIRLYWAGKGTTTIPFGSVYGPIISAISVNSDFTPPSENSRSIPSGAVAAIVVAGAIVIILVIGIMWWKGCFRLKYLGSRERRGLASQTGLFTLRQIKAATNNFDESFKIGEGGFGPVYKGVLLDGTIVAIKQLSSKSTQGSREFINEIGMISTLQHPNLVKLYGFCMEDDQLLLIYEYMENNSLAHALFAKKEDLENRQLRLDWKTRKRICIGIAKGLAYLHGESKIKIIHRDIKATNVLLDKDLNPKISDFGLAKLNEDDKTHMNTRIAGTYGYMAPEYAMHGYLTDKADVYSFGIVVLEIVSGNNNTVSHPQEECFSLLDWARLLKEKDNLMELVDRRLGEDFKKEEVTMMINVGLLCTSFSPSLRPSMSSVVSMLEGRTNVQEVVAESTEVLDDKKYKVMQQYYKHRGENSASEAGSQSIATDESNAFIYDTDSSYWEPRN* 1003
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g2289 1002 SUPERFAMILY L domain-like 80 357 - -
Mal5g2289 1002 Gene3D Phosphorylase Kinase; domain 1 633 736 - -
Mal5g2289 1002 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 73 288 - -
Mal5g2289 1002 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 288 344 - -
Mal5g2289 1002 Pfam Leucine rich repeat 276 335 IPR001611 GO:0005515
Mal5g2289 1002 Pfam Malectin domain 400 584 IPR021720 -
Mal5g2289 1002 SMART serkin_6 661 936 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g2289 1002 ProSiteProfiles Protein kinase domain profile. 661 946 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g2289 1002 SUPERFAMILY Protein kinase-like (PK-like) 644 937 IPR011009 -
Mal5g2289 1002 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 382 969 - -
Mal5g2289 1002 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 382 969 - -
Mal5g2289 1002 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 73 288 - -
Mal5g2289 1002 Gene3D Transferase(Phosphotransferase) domain 1 737 963 - -
Mal5g2289 1002 Gene3D Ribonuclease Inhibitor 33 200 IPR032675 -
Mal5g2289 1002 CDD STKc_IRAK 667 938 - -
Mal5g2289 1002 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 288 344 - -
Mal5g2289 1002 Gene3D Ribonuclease Inhibitor 202 395 IPR032675 -
Mal5g2289 1002 Pfam Protein kinase domain 664 931 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g2289 1002 ProSitePatterns Serine/Threonine protein kinases active-site signature. 787 799 IPR008271 GO:0004672|GO:0006468
Mal5g2289 1002 Gene3D - 399 589 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g2289 Mal-Chr5 58650836 58661308 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g2289 24 970 Receptor kinase-like Gene Family AT1G53420 53.445 0.0 977
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mal5g2289 Pkinase 2e-49 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g2289 5 58650836 58661308 Mal5g2289 5 58650836 58661308 ECH