Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g2286 ATGTATGAGATAATCCTAACAAGCTCACCGGACGGTCCCATGATAGCATTTGATGCTTCGACTGGTTCCACGGTTGTGCAGTTCACTGGCAGCCGATCACCATGTCGCGGACTCATGGTGACAAGCCAAGGACTCATAGCAACTTCTCATGTGTCCTCAGACACAGGGTCAGGCTCAATCCACATTTACAATTGGCAAACTTCAACGGTCTTCCAAAACATCCCTCTCTCCGAACCGGTCGCTCCACTAGCGGCCACATTGGATGGTGACTTTCTCTTTGCAGGTGGCGTGTCGGGGAGTATCTACTCCCTGTCACTCCCTTCTGGAGATATCGCCAGATCATTCACTCCTCACTCGAAATCTATTTCTAGTCTCCACTTCAGTAATGATGGATCACTACTGATTTCAGGTAACAATGATGGCACTATTGTTGTGATCCCATCATGTAAACTTGTTGATGAATCCTCATCTTGTAGTGACCCAATCTTACACAAATGGAAGGCACATTCTGATTCAGTGACAGGTTTCAACTCTGGAATTGGGATTCATACTTGTACATTCACTTCATGTTCGATGGACTGCACATGTAAGTTTTGGAGTTTATCGAATGGGGTAACTCTAATGCGAACCGTGACATTCCCATGTGCCATTTTTGGGTTTGTTATGGATGCAACAGAGTCAGGGTTCTATGCTGGTGGTTCAGATGGGTTTGTTTATAAAGGGTTAATGAAGGTTGGGAATAGAAAAATGTTAGAAAAAGGAAAAGCTTATGAGTTGGTTAATTTGGGTAAAAAAGCAAGAAGCCATGATGGGTCAATTATGTCTTTGGTTTTGGTGAATGAAGGGAGGAATTTGGTGTCTGCTTCAGAAGATGGGAGTGTTTGGATGTGGGATGTTGAGAAAGGTGAAGTCATTATGGTTTTGGGGAATGAACGAATATTGGGAAGAAGATCAACAAGAAGCATTAGTGATATGATTGTGGTCAAAGGGAGTAATGTTACAAAGGGAAATGCTAGTAGTGAAGGTGGTGCTAGAAGTGGTTTTAGTTCTTCTGGATTATGTGATGAAGAGATGATTAAGACTTTGATGCAAATTAAAGAGCTTGGAAATGTGATGGATGTGGCAGTTCATGACAAGAAAAGAGCCATTGATATGCTTGAATCTGCTATTGCAATGTATGAGAGGCTATTGAGGCTTATTCTTAGGGAAGTTACCATAGCAATTGAAGAGGCAGATCATGAAGATGAAAACATCGACAACAAAGGGGAAAAAGATTAG 1278 0.4225 MYEIILTSSPDGPMIAFDASTGSTVVQFTGSRSPCRGLMVTSQGLIATSHVSSDTGSGSIHIYNWQTSTVFQNIPLSEPVAPLAATLDGDFLFAGGVSGSIYSLSLPSGDIARSFTPHSKSISSLHFSNDGSLLISGNNDGTIVVIPSCKLVDESSSCSDPILHKWKAHSDSVTGFNSGIGIHTCTFTSCSMDCTCKFWSLSNGVTLMRTVTFPCAIFGFVMDATESGFYAGGSDGFVYKGLMKVGNRKMLEKGKAYELVNLGKKARSHDGSIMSLVLVNEGRNLVSASEDGSVWMWDVEKGEVIMVLGNERILGRRSTRSISDMIVVKGSNVTKGNASSEGGARSGFSSSGLCDEEMIKTLMQIKELGNVMDVAVHDKKRAIDMLESAIAMYERLLRLILREVTIAIEEADHEDENIDNKGEKD* 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g2286 425 PANTHER OS09G0477800 PROTEIN 2 415 - -
Mal5g2286 425 Pfam WD domain, G-beta repeat 163 200 IPR001680 GO:0005515
Mal5g2286 425 Pfam WD domain, G-beta repeat 113 145 IPR001680 GO:0005515
Mal5g2286 425 ProSitePatterns Trp-Asp (WD) repeats signature. 285 299 IPR019775 -
Mal5g2286 425 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 4 303 IPR011047 -
Mal5g2286 425 SMART WD40_4 259 298 IPR001680 GO:0005515
Mal5g2286 425 SMART WD40_4 159 200 IPR001680 GO:0005515
Mal5g2286 425 SMART WD40_4 108 147 IPR001680 GO:0005515
Mal5g2286 425 SMART WD40_4 21 64 IPR001680 GO:0005515
Mal5g2286 425 Gene3D - 153 322 IPR015943 GO:0005515
Mal5g2286 425 Gene3D - 3 152 IPR015943 GO:0005515
Mal5g2286 425 ProSiteProfiles Trp-Asp (WD) repeats profile. 266 307 IPR001680 GO:0005515
Mal5g2286 425 ProSiteProfiles Trp-Asp (WD) repeats profile. 115 145 IPR001680 GO:0005515
Mal5g2286 425 PANTHER WD-REPEAT PROTEIN 18 2 415 IPR045227 -
Mal5g2286 425 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 115 145 - -
Mal5g2286 425 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 266 303 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g2286 90 301 U-box Gene Family AT1G04510 26.389 3.92e-09 56.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g2286 5 58539642 58541044 Mal5g2286 5 58539642 58541044 ECH