Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mal5g2285 | ATGAGAAGAACAATCCCCTTTCTGCTACTAAAGCAAACTTCTTCACAGATCCACCTTTCTTCCATTCCCTCGTTCCTTCAATCTCCACACAATGCAACATCACCACCACCACCACCTTCTCGCACCTTCAAATCCCAATCCCTTCCTCCCCCAGAACTCGTCGAACCATTCTGCGACCTCTCAGACGTCGTCGTTTCCCCAAAACAAAACCTCCAACCTTCCCCATGGTTCACCCAAATCCTCAACCTCCTCGACAATTCCCCAACCATGGAATCAAATCTCGATTCCTTCTGCCAACAATTCCTCATCACTCTCTCCCCTTCCTTCGTTGCACACACTCTTCGTTCCCTTAACAACAACCACCACATCGCCCTCCGTTTCTTCTATTGGGCTTCCAATCAACGTAACTATTCCCATTCACTCGATTGCTACGTTTCACTAATCAACCTCCTCCTTTCCCCTTCTACAACCACCACCACGGCCGCCGCTTTAAATATTTTCGCCGAATTTCAACGTAACCGTCTCCCGCTTACTCTCCCAGCTGCCAATTCCCTCATTAAAAGCTTCGGAAACGCCGGCTTGGTTAACGAGCTTCTATTGGTATGGCGTGGAATGAATGAGCAAAATATCCAACCGAGTCTTTTTACTTACAATTCGCTTTTGAACGGACTCGTTGGTTCGTCTTTTATCGAATCAGCAGAGCGTGTTTTTGACGCAATCAAGGAAGGAAGAACAAAGCCTGACGTGGTTACTTACAATACTATGATCAAAGGGTATTGTAAGGTTGGGAAAACGCGAAAGGCAGTTGATATGGTTCGTGAAATGGAGGTGATTAACTTGGAGCCTGATGTTGTTAGTTATATGACGATAATGCAGGCTTGTTATGCTGAAGGTGATGTTGATTTTTGTTTGAGTCTTTATCATGAGATGGAGGATAAGGGATTGGAAGTTCCTTCTCATGTTTATAGTTTGGTGATATGTGGGCTTTGTAAGATGGGGAAAGTTTTAGAAGGGTATGCTTTGTTTGAGAATATGATTAGAAATGGTTGTAAGGGTAATAAGGCTGTTTATACTGCTTTGATTGATTGTTATGGGAAGAGTGGGAATTCTGATGGGGCTTTGAGGTTGTTTCAGAGGATGAAAATCGATGGGATTGAACCTGATGAGGTTACTTATGGTGCTATTGTTAACGGCTTGTGTAAGAGTGGGAGGGTGGAGGATGCTTTGGGTTATTTTCAGTTTTGTAATGAGAATGGTGTTGTTGTTAATGCTGTGTTTTATTCGAGTTTGATTGATGGACTTGGAAAGGCAGGGAGGGTTGATGAAGCCGAGAAGGTGTTTGATGAAATGGCTGACAAGGGATGTCCTCCGGATTCATATTGCTACAATGCGCTAATTGATGGATTGTGTAAGTGTGGGAGGATAGATGATGCTCTTGCGTTGTTTAAGAGGATGGAGCGCGATGGTTGTGAGCATACTGTGTATACGTTTACTATAGTCATTAGTGAGCTTTTTAGGGTGCATAGGAATGAAGAGGCGGTCAAGATGTGGGATTTGATGATTGACAAAGGGATAGCGCCAAATGTTGCTTGTTTCAGGGCTCTTTCGATTGGATTGTGTCTTTCAGGGAAGGTTGCGAGGGCTTGTAAAGTGTTGGATGAGCTTGCACCTATGGGGGTTGTTCTTGAAACTGCTTATGAAGATATGATTGGAGCGCTGTGTAAAGCCGGCCGCGTGAAGGATGCTTGTAAGTTGGCTGATGGAATTGTGGATAGGGGTAGAGAAATACCTGGGAAGATTAGGACTGTGATGATTCATTCCTTGAGGAAAGCTGGGAATGCTGATTTGGCTATCAAGTTGATGCATAGCAAGATTGGTATTGGGTATGAACGATTTCGGAGTGTTAAAAAGAGAGTATGCTAA | 1923 | 0.4399 | MRRTIPFLLLKQTSSQIHLSSIPSFLQSPHNATSPPPPPSRTFKSQSLPPPELVEPFCDLSDVVVSPKQNLQPSPWFTQILNLLDNSPTMESNLDSFCQQFLITLSPSFVAHTLRSLNNNHHIALRFFYWASNQRNYSHSLDCYVSLINLLLSPSTTTTTAAALNIFAEFQRNRLPLTLPAANSLIKSFGNAGLVNELLLVWRGMNEQNIQPSLFTYNSLLNGLVGSSFIESAERVFDAIKEGRTKPDVVTYNTMIKGYCKVGKTRKAVDMVREMEVINLEPDVVSYMTIMQACYAEGDVDFCLSLYHEMEDKGLEVPSHVYSLVICGLCKMGKVLEGYALFENMIRNGCKGNKAVYTALIDCYGKSGNSDGALRLFQRMKIDGIEPDEVTYGAIVNGLCKSGRVEDALGYFQFCNENGVVVNAVFYSSLIDGLGKAGRVDEAEKVFDEMADKGCPPDSYCYNALIDGLCKCGRIDDALALFKRMERDGCEHTVYTFTIVISELFRVHRNEEAVKMWDLMIDKGIAPNVACFRALSIGLCLSGKVARACKVLDELAPMGVVLETAYEDMIGALCKAGRVKDACKLADGIVDRGREIPGKIRTVMIHSLRKAGNADLAIKLMHSKIGIGYERFRSVKKRVC* | 641 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mal5g2285 | 640 | MobiDBLite | consensus disorder prediction | 30 | 45 | - | - | |
| Mal5g2285 | 640 | Gene3D | Tetratricopeptide repeat domain | 563 | 624 | IPR011990 | GO:0005515 | |
| Mal5g2285 | 640 | Gene3D | Tetratricopeptide repeat domain | 346 | 414 | IPR011990 | GO:0005515 | |
| Mal5g2285 | 640 | Gene3D | Tetratricopeptide repeat domain | 486 | 560 | IPR011990 | GO:0005515 | |
| Mal5g2285 | 640 | Gene3D | Tetratricopeptide repeat domain | 415 | 485 | IPR011990 | GO:0005515 | |
| Mal5g2285 | 640 | Gene3D | Tetratricopeptide repeat domain | 276 | 345 | IPR011990 | GO:0005515 | |
| Mal5g2285 | 640 | TIGRFAM | PPR: pentatricopeptide repeat domain | 215 | 249 | IPR002885 | - | |
| Mal5g2285 | 640 | TIGRFAM | PPR: pentatricopeptide repeat domain | 427 | 459 | IPR002885 | - | |
| Mal5g2285 | 640 | TIGRFAM | PPR: pentatricopeptide repeat domain | 183 | 213 | IPR002885 | - | |
| Mal5g2285 | 640 | TIGRFAM | PPR: pentatricopeptide repeat domain | 495 | 529 | IPR002885 | - | |
| Mal5g2285 | 640 | TIGRFAM | PPR: pentatricopeptide repeat domain | 390 | 413 | IPR002885 | - | |
| Mal5g2285 | 640 | TIGRFAM | PPR: pentatricopeptide repeat domain | 285 | 316 | IPR002885 | - | |
| Mal5g2285 | 640 | TIGRFAM | PPR: pentatricopeptide repeat domain | 356 | 389 | IPR002885 | - | |
| Mal5g2285 | 640 | TIGRFAM | PPR: pentatricopeptide repeat domain | 460 | 492 | IPR002885 | - | |
| Mal5g2285 | 640 | TIGRFAM | PPR: pentatricopeptide repeat domain | 321 | 353 | IPR002885 | - | |
| Mal5g2285 | 640 | TIGRFAM | PPR: pentatricopeptide repeat domain | 250 | 283 | IPR002885 | - | |
| Mal5g2285 | 640 | PANTHER | PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN MITOCHONDRIAL | 34 | 639 | - | - | |
| Mal5g2285 | 640 | Pfam | PPR repeat | 215 | 242 | IPR002885 | - | |
| Mal5g2285 | 640 | Pfam | PPR repeat | 321 | 350 | IPR002885 | - | |
| Mal5g2285 | 640 | Pfam | PPR repeat | 569 | 590 | IPR002885 | - | |
| Mal5g2285 | 640 | PANTHER | PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN PET309, MITOCHONDRIAL | 34 | 639 | - | - | |
| Mal5g2285 | 640 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 213 | 247 | IPR002885 | - | |
| Mal5g2285 | 640 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 458 | 492 | IPR002885 | - | |
| Mal5g2285 | 640 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 283 | 317 | IPR002885 | - | |
| Mal5g2285 | 640 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 388 | 422 | IPR002885 | - | |
| Mal5g2285 | 640 | SUPERFAMILY | HCP-like | 291 | 492 | - | - | |
| Mal5g2285 | 640 | MobiDBLite | consensus disorder prediction | 26 | 47 | - | - | |
| Mal5g2285 | 640 | Pfam | PPR repeat family | 423 | 471 | IPR002885 | - | |
| Mal5g2285 | 640 | Pfam | PPR repeat family | 355 | 401 | IPR002885 | - | |
| Mal5g2285 | 640 | Pfam | PPR repeat family | 247 | 294 | IPR002885 | - | |
| Mal5g2285 | 640 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 493 | 527 | IPR002885 | - | |
| Mal5g2285 | 640 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 353 | 387 | IPR002885 | - | |
| Mal5g2285 | 640 | Pfam | Pentatricopeptide repeat domain | 481 | 535 | IPR002885 | - | |
| Mal5g2285 | 640 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 318 | 352 | IPR002885 | - | |
| Mal5g2285 | 640 | Gene3D | Tetratricopeptide repeat domain | 113 | 275 | IPR011990 | GO:0005515 | |
| Mal5g2285 | 640 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 423 | 457 | IPR002885 | - | |
| Mal5g2285 | 640 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 248 | 282 | IPR002885 | - |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mal5g2285 | 1 | 629 | Glycosyltransferase | AT1G05670 | 24.784 | 2.24e-52 | 190 |