Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g2201 ATGACCGTCGATGCTCACCATCTCAACCTTTTTCCTTCTCAACTTCAACCCAACAACAGAGACATCATCATGAATCTCACTAACACAAACAACATGAACATGTACAGCAATTACCCATCACTGCTTCCACTTTCCGTCACAACCACCGCGTCGGAGAATCTCATTCCGTCGCAATCTCCGTCGTACAACCCCTTCATAGCCGATTTCCTCCGTCAAAAAATGACCACCACCACCATGAAACCAGACAACATCCTCGCTTACAACACCAACAACAACGTTGTTTCGTTCCCACAAAAACGTTCCAGAGATTCAATCAACTACTATCCTTTCATCAGTGAAGATTTATCTCAAAACATCTACCACCAAAACACCGACATCGACCACATCTTTTCTCAACATATGGAGAAAATGAGAGTTGAGTTAGAACAAAAGAGAAAAAGAGAAGCTATGATGATAATGGAAGCAACAGAAAGAGGAATAATGAAGAAAATGAAGGCAAAAGATGAAGAGATAGAAAAGATCCAAAGAATGAACATTTTTCTTCAAGAAAAAGTGAAAACGCTTCTAATGGAGAATCAAATATGGCAAGAGTTAGCACAAAACAATGAAGCTACAGCAAATACTCTCAGAAACAATCTAGAACAAGTCCTTATGCAGCAGATGAGAAACAACGGTGGTGGCGGGGAAGATAGCGGCGGAGATGTCGCCGTCATAGTGGCGGAGGATGCTGAGTCATGCTGCAGTAATGATGATTATAATGGGTGGTGCAATGTAGCAGAAGCTGCGCAGGATAATGGTGAAGGTACAAGTAGTGGTAGAGTGATGAATAGATTGTGCAGAAATTGTGGGGAAGGTGAATCGTGTGTACTGATCATGCCTTGCAGACACTTGTGTTTGTGTACAATGTGTGGGGCTACGGTTATTTCTTGTCCTATCTGTGATTCTCTCAAAACTGTTACTCTTAATGTTAATTTTAGTTGA 981 0.4149 MTVDAHHLNLFPSQLQPNNRDIIMNLTNTNNMNMYSNYPSLLPLSVTTTASENLIPSQSPSYNPFIADFLRQKMTTTTMKPDNILAYNTNNNVVSFPQKRSRDSINYYPFISEDLSQNIYHQNTDIDHIFSQHMEKMRVELEQKRKREAMMIMEATERGIMKKMKAKDEEIEKIQRMNIFLQEKVKTLLMENQIWQELAQNNEATANTLRNNLEQVLMQQMRNNGGGGEDSGGDVAVIVAEDAESCCSNDDYNGWCNVAEAAQDNGEGTSSGRVMNRLCRNCGEGESCVLIMPCRHLCLCTMCGATVISCPICDSLKTVTLNVNFS* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g2201 326 Coils Coil 199 219 - -
Mal5g2201 326 PANTHER BOI-RELATED E3 UBIQUITIN-PROTEIN LIGASE 2-RELATED 1 325 - -
Mal5g2201 326 ProSiteProfiles Zinc finger RING-type profile. 279 314 IPR001841 -
Mal5g2201 326 Coils Coil 164 184 - -
Mal5g2201 326 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 258 323 IPR013083 -
Mal5g2201 326 PANTHER SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN 1 325 IPR017066 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g2201 Mal-Chr5 54382734 54383898 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g2201 262 313 Miscellaneous Gene Families AT4G39050 36.538 4.82e-07 49.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g2201 5 54382734 54383898 Mal5g2201 5 54382734 54383898 ECH
Mal4g1874 4 35733321 35734715 Mal5g2201 5 54382734 54383898 PCT