Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g2191 ATGGCGAAACTAGTACCCAGTTTAGTTCATCCATTGAAATCAAGGTTTTTCAGTAATCATCACAACACTCTTTTAACCAAACACTCTTTTAAACTTTATGGAGTTCAACCAAATCATTCATATTCTTCTTCTTCTTCCAAGATAAGCATGAGTCTCAAAGCTGGTATTGTTGGTCTCCCTAATGTTGGCAAATCTACCCTCTTCAATGCCGTTGTTGAAAACGGAAAGGCTCAAGCTGCCAATTTTCCTTTTTGTACGATAGAGCCAAATGTAGGGATTGTTGCTGTTCCAGATTCTCGTCTCCAAGTGCTTTCCGATCTCAGTAAATCACAACGAATGGTTCCAGCATCCATAGAGTTTGTAGATATTGCTGGCCTTGTAAAGGGTGCAAGTCAAGGCGAGGGTCTCGGCAATAAGTTTTTATCACATATTCGTGAGGTGGACTCCATACTTCAGGTTGTACGATGTTTTGATGATAATGACATTATTCATGTGAACGGGAAAGTTGATCCCAAGTCTGATATTGATGTTATCAACTTGGAGCTTGTTTTCACAGACTTAGACCAGATTGAGAAAAGACTGGATAAACTAAAAAAAGGCAAGACAAAGGATTCACAATCTAAAGTCAAGGAAGACGCAGAAAAGTCTGCATTGGAAAAAATTCGTGTAGCACTCTTGGATGGAAAACCTGCACGATCTGTGACCTTAACAGATTTTGAAAGGGAATCTGTAAAGCAACTTTGCTTGCTCACCATGAAACCCATTATATATGTGGCAAATGTTGCGGAGTCTGATCTAGCTGATGCTGCAAACAATGATTATGTTGTAGGTGTCAAGAATGTTGCAGCTGAGTTGCAGTCTGGAATTGTAACAATTTCAGCACAGGTTGAGGCAGATCTTACTGAACTTGCAATCGAGGAAAGACAAGAATATTTGAAATCTCTTGGTGTTGGTGAAAGTGGTCTTGGGAACCTAATTAGAGCAACCTATGAGCTTTTGGGACTGCGAACTTATTTTACTTCTGGCGAGAAGGAGACAAAGGCATGGACAATACTTGCAGGAATGACTGCACCTCAAGCTGCTGGAGTTATTCATTCTGACTTTGAGAAGGGTTTCATCCGAGCAGAGACAGTGGCTTATGATGACTTTGTTGCTGCTGGTTCACTTGGTGCAGCACGAGAAAAAGGACTTTTGAGATCTGAAGGTAAAGACTACATTGTACAAGAAGGAGATGTAATGTTGTTTCGATTCAATGTATAG 1260 0.404 MAKLVPSLVHPLKSRFFSNHHNTLLTKHSFKLYGVQPNHSYSSSSSKISMSLKAGIVGLPNVGKSTLFNAVVENGKAQAANFPFCTIEPNVGIVAVPDSRLQVLSDLSKSQRMVPASIEFVDIAGLVKGASQGEGLGNKFLSHIREVDSILQVVRCFDDNDIIHVNGKVDPKSDIDVINLELVFTDLDQIEKRLDKLKKGKTKDSQSKVKEDAEKSALEKIRVALLDGKPARSVTLTDFERESVKQLCLLTMKPIIYVANVAESDLADAANNDYVVGVKNVAAELQSGIVTISAQVEADLTELAIEERQEYLKSLGVGESGLGNLIRATYELLGLRTYFTSGEKETKAWTILAGMTAPQAAGVIHSDFEKGFIRAETVAYDDFVAAGSLGAAREKGLLRSEGKDYIVQEGDVMLFRFNV* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g2191 419 CDD YchF 54 333 IPR041706 -
Mal5g2191 419 TIGRFAM TIGR00092: GTP-binding protein YchF 50 419 IPR004396 GO:0005524|GO:0005525|GO:0016887
Mal5g2191 419 Gene3D - 163 253 IPR023192 -
Mal5g2191 419 PANTHER OBG-LIKE ATPASE 1 50 419 - -
Mal5g2191 419 Gene3D - 52 334 IPR027417 -
Mal5g2191 419 PRINTS GTP1/OBG GTP-binding protein family signature 137 155 IPR006073 GO:0005525
Mal5g2191 419 PRINTS GTP1/OBG GTP-binding protein family signature 54 74 IPR006073 GO:0005525
Mal5g2191 419 PRINTS GTP1/OBG GTP-binding protein family signature 120 135 IPR006073 GO:0005525
Mal5g2191 419 PRINTS GTP1/OBG GTP-binding protein family signature 76 94 IPR006073 GO:0005525
Mal5g2191 419 Hamap Ribosome-binding ATPase YchF [ychF]. 51 419 IPR004396 GO:0005524|GO:0005525|GO:0016887
Mal5g2191 419 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 52 357 IPR027417 -
Mal5g2191 419 Pfam Protein of unknown function (DUF933) 335 418 IPR013029 -
Mal5g2191 419 Gene3D - 98 418 IPR012675 -
Mal5g2191 419 CDD TGS_YchF_OLA1 333 417 IPR013029 -
Mal5g2191 419 ProSiteProfiles OBG-type guanine nucleotide-binding (G) domain profile. 52 334 IPR031167 GO:0005525
Mal5g2191 419 SUPERFAMILY TGS-like 335 416 IPR012676 -
Mal5g2191 419 PANTHER OBG GTPASE FAMILY 50 419 - -
Mal5g2191 419 Pfam 50S ribosome-binding GTPase 54 166 IPR006073 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g2191 Mal-Chr5 53354051 53361208 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g2191 5 53354051 53361208 Mal5g2191 5 53354051 53361208 ECH