LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mal5g2190	ATGGATGTGTTTACTGCTTCCGGGGTTGATTCTCTTGTTGCTTCCAACTCCCAAGATCTTAATCTTTTGGGAAATATTTCCAAAGATGGTGCATTATTTGATGCCTCACAATATGCATTCTTTGGTAAAGATGTTGCCGAGGAAGTTGAGTTGGGGGGATTAGATGATGTAAATGATTATATCCCTTCTGTTACATTCAACGAGGAGGAGTTTTTTCACAATGCAGAAGAGGCGGATGATGTAAGATCTCTTTCTGATGTTGATGATCTCACAACCACTTTTTTGAAGTTGAACAAAATTGTTGGTGGACCAAAAAGTGCTGGAGTTATTGGTGATCGGGTGTCAAGAGAAAATTCCTCTGCTTCTGAATGGTCACAGAGGGATGATGTTCCCTACTGGGTTGACCATCACGCATATGACAGTGAAGGTTCTCAGGATGTCAAACGATGGTCATCACATCCACATTCTTCTGTCCCCCATATACAAGAATCAAAGCCCTTGTACAGAACATCCTCTTATCCTGAGCAGCAACGGCAGCTGCAGCACCAACTCCAACATCGTTCTAGTGAACCTGTTCCTAACTGGTTTGAGCAGCAGTTTTATGATAGTGAAATTGCTGATGATGGCAAGAGATGGTCATCACATCCACATTCCTCCATTTCACACATAGAAGGACCGAAGCCCTTGTATAGAACATCGTCTTATCCTGACAAGCAACAAGAGCTTCCTCGTTTTTCGAGTGAACCAATTTTGGCACCGAAATCTTCTTTTACTTCTTATCCTCCCCCTGGGGGTAGGTCTCTACAATCTTCTCCAAATTACAGTACAGGCCAGTTGAATGTTCCTTATGCTGGGGGAGCTCACATGGCATTGTCATCACAAAATCGCTCCCATTTACTCAACTCTGCATTACACTTGGGTGGATCAACATATGAGCCTCATTTCGGTGGAAATTTGGGGCAATTTAATACTGGCTCCTCCCTCAATAATCGAATCCAGAATCAATTGGTCAACCAAACAGGGTTGTATCTTGGAGATAATTCAAACCTCCTGAATAATATGTTGCAGCAACAGCTTTACCATCATAATGGATCAGTGTCTCCTCACTTACTGACTCAGTTGCAGCAACAGCAGCACAGATTGCATTATCCTGTTCACCAGTCAGCAGGCTTAATGTCAGGTGTTCAGCCAAATTTATTTAATCACCATCCTCCGTCTGGATCGTCCATTGTTAGAGAGCATAGACAAAAACCAACTCGTAGACATCGGTTCTCTCAACAGTGTTCTAATGCCAGTAACCAGAAGAGCGAAAGTTGTTCAATACAGTTCAGGTCCAAGTATATGACTAGCGAAGAAATTGAGAGTATTCTTAAAATGCAGCTTGCTGCTGTGACTCATTTTAATGACCCATATATTGATGACTATTATCACCAAGCCTGTCTAGCAAAAAAACCTTCTGGTGCTAAATTTAAATTTTCATTTTGCCCAACCAAAATGAAGGATCTTTCTTCACGATCCCGTGCCAATACTGAGCCACACGGATTCCTTCAGGCTGATGCTATAGGGAGGGTTTCATACTTGCCCATTCGTCAGCCTCGCCCTCTTCTTGAAGTTGATCCTCCAAACTCCTCTGGTAGCTGTGGCTCTGAGCGAAATATTCCAGAGAAGTCCCTTGAGCAGGAGCCTTTATTTGCAGCCAGAATCACAATTGAGGATGGTCTCTGTCTTCTTCTCGATGTAGATGATATTGATCGTTTCCTTAAGTGCAATCTGCTACAAGATGGTGGAACTCAATTCATACGAAGAAGGAATGTCCTTTTGGAAGGATTAGCAACATCACTTCATCTCGTGGACCCATTGGGAAAGAATGGACCCAAAGCTGGGTTTACTGCCAAGGATGACCTTGTTTTCTTACGATTAGCATCTATTTCCAAGGGACGGAAGCTCTTAGCTAAGTATCTTCGGTTGCTTGTTCCTGGTAGTGAGATTGTGCGGGTTGTCTGCATGGCTATATTTCGTCATCTAAGATTCTTATTTGGTAGTATCCCCTCTGATTCATCAGCAGCAGAGGCTACAAGTGATCTTGCTATGGTTGTTTGTCAGTGTATCCAAGGAATGGATCTTGGTTCTCTTGGTGCTTGTCTTGCTGCAGTGGTTTGTTCCTCAGAGCAGCCTCCTCTGCGCCCCCTTGGAAGCCCTGCTGGAGACGGTGCTTCCCTTGTTTTAGCATCTGTTCTCGAAAGTGCTGCTAAACTTCTAACTGATCCTCAAGCTGCTTCTAACAAAAAATTGGGTAATCGTTCATTTTGGCAGGCCTCATTTGATGAATTTTTTGGCCTCCTCACAAAGTATTGCATGAATAAGTACCAGAGTATCATGCAATCACTGGTTATACAAGGGGAACAAAATGTGGCTGCTATTGGATCGGATGCTGCTGAAGCAGTTAGTAAGGAAATGCCTGTTGAGATCTTACGTGCAAGTCTTCCTCACACCAACGACCGGCAGAGAAAGTTATTACTAGATTTTGCTCAGCGTTCTGCGCCTGTGGCTGGATTTAACAGCTATCCTGGGAGCAGTAGCAGTCGTGTGAACTCGGAGACAGTGCTCAGTTGA	2613	0.4367	MDVFTASGVDSLVASNSQDLNLLGNISKDGALFDASQYAFFGKDVAEEVELGGLDDVNDYIPSVTFNEEEFFHNAEEADDVRSLSDVDDLTTTFLKLNKIVGGPKSAGVIGDRVSRENSSASEWSQRDDVPYWVDHHAYDSEGSQDVKRWSSHPHSSVPHIQESKPLYRTSSYPEQQRQLQHQLQHRSSEPVPNWFEQQFYDSEIADDGKRWSSHPHSSISHIEGPKPLYRTSSYPDKQQELPRFSSEPILAPKSSFTSYPPPGGRSLQSSPNYSTGQLNVPYAGGAHMALSSQNRSHLLNSALHLGGSTYEPHFGGNLGQFNTGSSLNNRIQNQLVNQTGLYLGDNSNLLNNMLQQQLYHHNGSVSPHLLTQLQQQQHRLHYPVHQSAGLMSGVQPNLFNHHPPSGSSIVREHRQKPTRRHRFSQQCSNASNQKSESCSIQFRSKYMTSEEIESILKMQLAAVTHFNDPYIDDYYHQACLAKKPSGAKFKFSFCPTKMKDLSSRSRANTEPHGFLQADAIGRVSYLPIRQPRPLLEVDPPNSSGSCGSERNIPEKSLEQEPLFAARITIEDGLCLLLDVDDIDRFLKCNLLQDGGTQFIRRRNVLLEGLATSLHLVDPLGKNGPKAGFTAKDDLVFLRLASISKGRKLLAKYLRLLVPGSEIVRVVCMAIFRHLRFLFGSIPSDSSAAEATSDLAMVVCQCIQGMDLGSLGACLAAVVCSSEQPPLRPLGSPAGDGASLVLASVLESAAKLLTDPQAASNKKLGNRSFWQASFDEFFGLLTKYCMNKYQSIMQSLVIQGEQNVAAIGSDAAEAVSKEMPVEILRASLPHTNDRQRKLLLDFAQRSAPVAGFNSYPGSSSSRVNSETVLS*	871

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mal5g2190	870	MobiDBLite	consensus disorder prediction	150	178	-	-
	Mal5g2190	870	MobiDBLite	consensus disorder prediction	260	274	-	-
	Mal5g2190	870	PANTHER	PROTEIN PAT1 HOMOLOG	193	849	-	-
	Mal5g2190	870	MobiDBLite	consensus disorder prediction	208	229	-	-
	Mal5g2190	870	MobiDBLite	consensus disorder prediction	252	274	-	-
	Mal5g2190	870	PANTHER	PROTEIN PAT1 HOMOLOG	15	192	-	-
	Mal5g2190	870	MobiDBLite	consensus disorder prediction	144	178	-	-
	Mal5g2190	870	PANTHER	TOPOISOMERASE II-ASSOCIATED PROTEIN PAT1	15	192	IPR039900	GO:0000290
	Mal5g2190	870	PANTHER	TOPOISOMERASE II-ASSOCIATED PROTEIN PAT1	193	849	IPR039900	GO:0000290

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mal5g2190	Mal-Chr5	53193977	53199138	Dispersed/Wgd

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Mal5g2190	5	53193977	53199138	Mal5g2190	5	53193977	53199138	ECH
	Mal4g1864	4	35467240	35474894	Mal5g2190	5	53193977	53199138	PCT