Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g2183 ATGATTTGTTTTAAAATAGAAAAACTAGTTGTGTTCTTCATCATATACTTATTATGGTTTACATGGAGTACTACAACTACTACTATTATTCATGTTAAAGCACAACAAATTTATAGTTTGAAGCCTGGTGATACACTGAATGCCTCATCATATCTTTATTCTAAACAAGATTCAGCAATTTTATCACTAGACTACTCTGGTGTGCTCAAAATAGACACTCAAGATGGAAAATCACCAAAAACCATTTACTCATCACCTCGACCGATAAACAACACTGTTGCCACCTTGTCAGACACAGGTAACTTTGTGCTTCAACAACTTCACCCCAATGGGACTAAAAGTCATGTATTGTGGCAGAGTTTTGATTCTCCTACACAGACTTTGGTGCCTACAATGAAGTTAGGTGTTAACCGAAAAACAGGACATAATTGGTCACTGGTTTCGTGGCTGATTCCTTTGGTCCCAATTCCTGGTACTTTTAGTCTTGAATGGGAACCGAAAGAACGAGAATTGAACATTAAGAAACAAGGCAAAGTGTACTGGAAAAGTGGAAAACTTACAAGCAACGGATTATTCGAGAACATTCCAGAGAATGTCCAACGTGCGTATCGACACATGATTGTCTCTAACAAAGATGAAGACTCCTTCACTTTCGAAATCAAAGATCGGAAGTATGAAAAATTTCCAGGGTGGATACTATTACATAATGGGAGGTTAACGAGTATCGAAGGCGACATTGGAAATGCCGATATGTGTTATGGGTATAATAGCGATGGTGGATGCCAAAACTGGGAGAATATACCAAATTGTAGGGATCAAGGTGAAGTATTTCAGAAAAAGAGTGGTAGTCCCAATTTAGACAATGCAACATATGAAGATAGTGCACTTTATGGTTATAGTGATTGTAAGGCAAGTTGTTGGAGAAACTGTAATTGCACTGGATTCAAAGAATTTTATGCTAATGGGACTGGATGTATATTCTATTCACGGAATTCAACCAACGATCTTAATTTTGGGGATGATAGTAGTAGTTTTCATTCCCTGGTAAAGCCAATAAAGGTAGCCCCAAAGGTATCCCTCCATGTGAATGCAGGTAAAAAAAAGTGGATATGGATAACTGCGGTAATAGCAGCTGCTTTACTTTTAATATGCCCATTCATTTTATGCCTAGCAATAAAGAAACAAAAATACATGCGAGGGAAGAAAAGTAAAAGACAGGGGAATGAGATGCAAAATTTGGCAGCTTGTAATGAATCATATGGTATCAAAGATCTTGAAGATGACTTCAAGGGACATGATATAAAAGGAATCTTGGCAACAGGGCAAGAAGTAGCTATTAAAAGACTTTCAAAAACTTCTGGTCAAGGAATTGTGGAATTCAAAAATGAATTGGCACTGATATATTGTACAAAAAGGAAAATGCTAGATTGGAAGAAGCGCTTCAACATAATAGAAGGAATTTATCAAGGACTACTCTATCTTCATAAGTACTCGAGACTCAAAATCATTCATAGAGACTTGAAAGCAAGCAACATACTTCTTGATGAGAATATGAACCCAAAAATTTCTGATTTTGGTATGGCGAGAATGTTCACACAACAGGAATCCACCATAAATACTAATAGGATTGTTGGAACGTATGGATATATGTCTCCAGAGTATGCCATGGAAGGAGTTTGTTCTGCAAAGTCTGATGTCTATAGCTTTGGAATTTTGCTACTTGAAATTATTTGTGGAAGAAAAAACAATAGCTTCTATGACGTTGATCGCCCACTAAATCTAATAGGACATTATCTACAATTAATGGATCCAACATTAAATGACACATTTGTTCCAGATGAAGTGCAAAAGTGCATTCATGTTGGTCTCTTATGTGTTGAGCATTATGCAAATGATCGACCTACAATGTCTGATGTTATATCGATGTTAACAAGCAAATATCTCTTTGAAGGGGAAACAACTTCCAAAATGTCAGACACTGGCACCTTTTCTACGACAGCAATTTCTACCTCATTTGAAGTAGAAAAGAATATATAA 2037 0.3643 MICFKIEKLVVFFIIYLLWFTWSTTTTTIIHVKAQQIYSLKPGDTLNASSYLYSKQDSAILSLDYSGVLKIDTQDGKSPKTIYSSPRPINNTVATLSDTGNFVLQQLHPNGTKSHVLWQSFDSPTQTLVPTMKLGVNRKTGHNWSLVSWLIPLVPIPGTFSLEWEPKERELNIKKQGKVYWKSGKLTSNGLFENIPENVQRAYRHMIVSNKDEDSFTFEIKDRKYEKFPGWILLHNGRLTSIEGDIGNADMCYGYNSDGGCQNWENIPNCRDQGEVFQKKSGSPNLDNATYEDSALYGYSDCKASCWRNCNCTGFKEFYANGTGCIFYSRNSTNDLNFGDDSSSFHSLVKPIKVAPKVSLHVNAGKKKWIWITAVIAAALLLICPFILCLAIKKQKYMRGKKSKRQGNEMQNLAACNESYGIKDLEDDFKGHDIKGILATGQEVAIKRLSKTSGQGIVEFKNELALIYCTKRKMLDWKKRFNIIEGIYQGLLYLHKYSRLKIIHRDLKASNILLDENMNPKISDFGMARMFTQQESTINTNRIVGTYGYMSPEYAMEGVCSAKSDVYSFGILLLEIICGRKNNSFYDVDRPLNLIGHYLQLMDPTLNDTFVPDEVQKCIHVGLLCVEHYANDRPTMSDVISMLTSKYLFEGETTSKMSDTGTFSTTAISTSFEVEKNI* 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g2183 678 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 55 434 - -
Mal5g2183 678 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 468 647 - -
Mal5g2183 678 ProSiteProfiles PAN/Apple domain profile. 270 349 IPR003609 -
Mal5g2183 678 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 55 434 - -
Mal5g2183 678 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 434 467 - -
Mal5g2183 678 SUPERFAMILY alpha-D-mannose-specific plant lectins 42 149 IPR036426 -
Mal5g2183 678 ProSiteProfiles Protein kinase domain profile. 315 648 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g2183 678 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 434 467 - -
Mal5g2183 678 ProSitePatterns Serine/Threonine protein kinases active-site signature. 502 514 IPR008271 GO:0004672|GO:0006468
Mal5g2183 678 Gene3D - 34 185 IPR036426 -
Mal5g2183 678 SMART serkin_6 429 648 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g2183 678 Gene3D Transferase(Phosphotransferase) domain 1 462 662 - -
Mal5g2183 678 Pfam D-mannose binding lectin 56 149 IPR001480 -
Mal5g2183 678 SUPERFAMILY Protein kinase-like (PK-like) 435 643 IPR011009 -
Mal5g2183 678 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 468 647 - -
Mal5g2183 678 Pfam PAN-like domain 285 330 IPR003609 -
Mal5g2183 678 Pfam Protein kinase domain 471 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g2183 Mal-Chr5 53119529 53125244 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g2183 431 645 Receptor kinase-like Gene Family AT4G11530 49.430 5.69e-72 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mal5g2183 Pkinase 1.2e-27 CL0016