Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g2179 ATGAAACAAATTGTTTTGATATACTTATGGTTGTGGTGGAGTATTTGTGTCAATGCAACATACGATAGTTTGAAGCCAGGTGATAACATTGAATTCCAATTCCACGCTATTTCTATCACTAGACTACTCTGGTGTGCTCAAAATAGGAAATTACCAATAATCATTTACTCTTCACCTCAACCTACCAACAACACTCTGGCCACTATCTTAGATACGGGTAACTTTGTGCTTCAACATCTTTATCCAAATGGTACAAAGAGACATAATTGGTCATTGGTTTCATGGTTGGCTCCTTCAATACCAACTTCAGGTGTATTTAGTCTTGAATGGGAACCAAAACAAGGTGAATTGAACATTAAGCACCGCGGCAAAGTGTATTGGAAAAGCGGAAAACTTAAAAGCAATGGAATATTCGAGAACATTCCGGAAAATTTTCAGCATATGTATAAGTACATTATTGTCTCTAACAAGGATGAAGATTCTTTAGCTTTCAAAGTTAAAGATGGGAAGTTCATACGATACGATGAAACTGTTAGTGCAGAAATTGGAAATGCAGATATGTGTTATGGATATAATAGTGATGGAGGGTGTCAAAAATGGGAGGATATACCAACTTGCAGGGAACCTGGTGAAGTTTTTCAGACAAAGGCGGGAACACCAAAAATGGACAATACAACAACATTTGAAGTGGATGCGATTTATGGTTACATTGATTGCAAGATGAGATGTTGGAGAAATTGTAACTGCAATGGATTTGAAGAATTATATGATAATTTGACCGGATGTATATTCTATTCATGGAATTCGACACAAGATGTTGATTTGGAGAGTCGGTTTACCTTCTACGGCTTGGTAAAGCCAACAAAATCAGCTCCGAATTCCAACGGTAAAAGGTGGATATGGATAGGTGCTGCAATCGCTGCGGCTTTACTCATATTATGTCCATTCATTTTATGCATAGTCAACAAGAAACAAAAATATGCACTTCAAGATAAGAAAAGTAAAAGAAAGGAGGATTCCAATGAATCCTATGATATCAAAGATCTTGAAGATGAATTCAAGGGACATGATATAAAAGTGTTTACCTATACATCAATTTTGGAAGCAACTATGAACTTCTCCCTTGAAAACAAGTTAGGACAGGGAGGTTATGGACCCGTTTATAAGGGAATCTTGGCAACAAGGCAAGAAGTTGCTGTAAAAAGACTTTCAAAAACATCTGGACAAGGAATTGTGGAATTCAAAAATGAATTGGTATTGATATGTGAACTTCAACACACAAATCTTGTACAACTACTTGGTTGTTGCGTTCATGAAGAAGAAAGGATTCTAATTTACGAATATATGCCAAACAAAAGCTTGGATTTCTATCTATTTGAATATGCCATGGAAGGGATTTGTTCAACAAAATCTGATGTCTATAGCTTTGGAGTGTTGCTTCTTGAAATTATTTGTGGAAGAAGAAACAATAGCTTCTATGATGTTGATCGCCCGCTAAGTCTAATAGGACATGCATGGGAGCTATGGAATGATGGTGAGTATATAAAGCTAATAGATCCAACATTAAATGACACATTTGTTGTTGATGAAGTGCAAAGGTGCATTCATGTTGGTCTCTTATGTGTAGAACAATATGCAAATGATTGA 1647 0.3613 MKQIVLIYLWLWWSICVNATYDSLKPGDNIEFQFHAISITRLLWCAQNRKLPIIIYSSPQPTNNTLATILDTGNFVLQHLYPNGTKRHNWSLVSWLAPSIPTSGVFSLEWEPKQGELNIKHRGKVYWKSGKLKSNGIFENIPENFQHMYKYIIVSNKDEDSLAFKVKDGKFIRYDETVSAEIGNADMCYGYNSDGGCQKWEDIPTCREPGEVFQTKAGTPKMDNTTTFEVDAIYGYIDCKMRCWRNCNCNGFEELYDNLTGCIFYSWNSTQDVDLESRFTFYGLVKPTKSAPNSNGKRWIWIGAAIAAALLILCPFILCIVNKKQKYALQDKKSKRKEDSNESYDIKDLEDEFKGHDIKVFTYTSILEATMNFSLENKLGQGGYGPVYKGILATRQEVAVKRLSKTSGQGIVEFKNELVLICELQHTNLVQLLGCCVHEEERILIYEYMPNKSLDFYLFEYAMEGICSTKSDVYSFGVLLLEIICGRRNNSFYDVDRPLSLIGHAWELWNDGEYIKLIDPTLNDTFVVDEVQRCIHVGLLCVEQYAND* 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g2179 548 ProSiteProfiles Protein kinase domain profile. 373 548 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g2179 548 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 88 460 - -
Mal5g2179 548 Gene3D Phosphorylase Kinase; domain 1 330 448 - -
Mal5g2179 548 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 460 548 - -
Mal5g2179 548 Pfam Protein tyrosine and serine/threonine kinase 374 459 IPR001245 GO:0004672|GO:0006468
Mal5g2179 548 SUPERFAMILY Protein kinase-like (PK-like) 358 543 IPR011009 -
Mal5g2179 548 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 460 548 - -
Mal5g2179 548 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 88 460 - -
Mal5g2179 548 Gene3D Transferase(Phosphotransferase) domain 1 458 535 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g2179 Mal-Chr5 52984600 52987755 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g2179 460 544 Receptor kinase-like Gene Family AT4G23230 55.294 8.91e-24 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mal5g2179 PK_Tyr_Ser-Thr 6.7e-16 CL0016