Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g2173 ATGTGTTATGGGTATAACACTAATGAAGGGTGCCAAAAATGGGGTGAAGCAGAGATACCAACTTGCAGGTATCCTGGGGATAAGTTTGATAGCAAGCCCGTTTACAGTAATGAAAATATGGTATACGATATAGAAAATTCTAGTTATGGCATAAGTATTGCCAAGCTATGTGCTAAAGTAACTGCAGTTGCTTTGGATTCAAAAACTCCTGGAATGGGGACTGTTCTACTCATTATCGGCCTTCCCGTTCTGTTTCTTGCCTTAAGGAAACGAAAATATGTGCTTCAAGAATGCAGATTGAGATTCAAGATCTTGAAGGTTCTAGGCGATACTCTAGAAGGTGATTTAAGCAACGGATATGACTTAAAAGTGTTTTTCTATTCATCAATAATTGTGGCTACCAATGGCTTTTCTCCTGAACACAAGTTAGGACAGGGTGGCTTTGGACCTGTTTTTAAAGGAATTCTACCTTCAGGGCAAGAAGTAGCAGTGAAGAAACTTTCAAAAACTTCTGGAAAAGGAATGACTGAGTTTAAAAATGAATTAACACGCATTTGTAAGCTTCAGCATACAAACCTTTACATTCCCAACAAAACCTTGGACTTCTTTTTATTTGATTCCACTAGAAGAAAGTTGCTAGATTGGAACAAACGCTTTAACATAATAGAAGGAATTGCTCAAGGATTATTATACCTTCACAAATACTCAAGACTCAGAATTATACACAAAGATTTGAAGGCTAGTAATATCCTCCTTGATGAAAATATGAACCCCAAAATTTATGATTTTGGTGTGGCAAGAATGTTCACAAAACAAGAAACCGAAGCAAATACCAATAGAATTGTTGGGATATACGGTTACATTTCTCCAGAGTATGCGATGGAAGGAGTTTTTTCTACAAAGTCTGATGTGTATAGCTTCGGAGTGCTGCTCCTTGAAATTATCAGTGGTGAAAAAAACAATAGCTTCTACAGTGAAGACAGACCACTTAATCTAGTAGGACATGCATGGGAGTTATGGAAAGACGGTATGGTTCTTCAGTTGGTGGATCCATCAATAAATGGGTGGTTTTCTGAGGATGAGGTGCTGAGATGTGTTCATGTTGGTTTATTATGCGTAGAACAAGATGTAGATGATCGTCCCACCATGTCCAGTGTTATATCAATGTTAACAAACAAAATTAAAGTGAATGTTTTGCCTAAAAAACCAGCATACTATAGTAGAACAAGAGTTTTTGAGGAAGAAACGTATGCCGAAGAAGTTGGTTTGGTTTCCACACATGAAACTCTCATTCACATAAACAATCAATATAGTTAG 1317 0.3713 MCYGYNTNEGCQKWGEAEIPTCRYPGDKFDSKPVYSNENMVYDIENSSYGISIAKLCAKVTAVALDSKTPGMGTVLLIIGLPVLFLALRKRKYVLQECRLRFKILKVLGDTLEGDLSNGYDLKVFFYSSIIVATNGFSPEHKLGQGGFGPVFKGILPSGQEVAVKKLSKTSGKGMTEFKNELTRICKLQHTNLYIPNKTLDFFLFDSTRRKLLDWNKRFNIIEGIAQGLLYLHKYSRLRIIHKDLKASNILLDENMNPKIYDFGVARMFTKQETEANTNRIVGIYGYISPEYAMEGVFSTKSDVYSFGVLLLEIISGEKNNSFYSEDRPLNLVGHAWELWKDGMVLQLVDPSINGWFSEDEVLRCVHVGLLCVEQDVDDRPTMSSVISMLTNKIKVNVLPKKPAYYSRTRVFEEETYAEEVGLVSTHETLIHINNQYS* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g2173 438 ProSiteProfiles Protein kinase domain profile. 137 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g2173 438 SUPERFAMILY Protein kinase-like (PK-like) 121 411 IPR011009 -
Mal5g2173 438 Gene3D Transferase(Phosphotransferase) domain 1 196 403 - -
Mal5g2173 438 Pfam Protein tyrosine and serine/threonine kinase 140 389 IPR001245 GO:0004672|GO:0006468
Mal5g2173 438 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 1 60 - -
Mal5g2173 438 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 71 429 - -
Mal5g2173 438 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 1 60 - -
Mal5g2173 438 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 71 429 - -
Mal5g2173 438 SMART serkin_6 137 390 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g2173 438 ProSitePatterns Serine/Threonine protein kinases active-site signature. 240 252 IPR008271 GO:0004672|GO:0006468
Mal5g2173 438 Gene3D Phosphorylase Kinase; domain 1 113 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g2173 Mal-Chr5 52669962 52679611 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g2173 125 424 Receptor kinase-like Gene Family AT3G45860 53.438 7.77e-113 344
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mal5g2173 Pkinase 3.4e-30 CL0016