Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g2168 ATGAAGCCAGGAGATAAACTGAATGCCAGTGATACATCCATGTTGTGTTCTAAACAAGGTAGATATTGCATGAATTTTGACCAAACTCCGAATCCTAAAAACCAAACTTATCTCAGCATATTTGGACAAGGGAAAGATAATTGGTTAGTGTGGATTGCTAACAGAAACCAAAGTGTTGAAAAAAATTCAGCAGTTCTATCACTAGACTACTCTGGTGAGCTCAAAATAGAATCCAAATTTGGAGAACCAATAAAACTTTACACTTCACCTCAACCTTTTAACAATAGTACTATTTTGGTCGCTACCTTGTTGGATACAGGTAACTTTATATTGCAAGATATTCAGAAGAAGATTGTGTTGTGGCAAAGTTTTGATCATCCAACCGATAGTTTGCTCCCTGGGATGAAATTAGGTGTGAATCGTAAAACTAGTGAAAACTGGTCACTGGTTTCAAGCATTAGTGATTCAACCCTAGCTCCTGGTCCGTTCAGGCTTGAGTGGGAACCTACAAGAAAAGAATTGGTCATCAAGCATAGAGAAAAAGTTTATTGGAGAAGTGGAGAACTGATGGAAAACAATACATTTGAGTTTATATCCGGAGAAGACTTTAAGGTCAAAGTTGAGTCTAATGAGAATGAAGAGTACTTCTCATACACAACTCCAAACGAAGACGGTCTTACTAAATGGACGCTATTAGAAACTGGGAAACTGATAAACAGAGAAGGAAATGACATAGCAAGGGCTGATATGTGTTATGGGTATAACACTAATGAAGGGTGCCAAAAATGGGGTGAAGCAGAAATACCAACTTGCAGGAATCCTGGTGATAAGTTTGATAACAAGCCCGTTTACAGTAATGAAAATATGGTATACGATATAGAAAATTCTAGTTATGGCATAAGTGATTGCCAAGCTATGTGCTGGAGTAACTGCAGCTGCTTTGGATTCAAAAACTTTTATGATAATGGAACTGGCTGTGTCTTCTTGGTATCAACTAAAGGTCTTAACATTGCAGGCAGTGGTGATTACTTATTTTACATTCTAGTTAAGAACACCACAGATCACAAAGAAATTACAGTATCCAAGAAAGGTAACAATAACAAGAAGTGGATATGGATTTGTGTTGGAATGGGGACTGTTCTACTCATTATCGGCCTTCCCATTCTGTTTCTTGCCTTAAGGAAACGAAAATATGTGCTTCAAGAGAAGGAAATAATGAGAATGCAGATTGAGATTCAAGATCTAGAAGGTTCTAGGCAATACTCTAATGGCGATGATATAGAAGGCGATTTAAGCAATGGAGATGACTTAAAAGTGTTTAGCTATTCATCAATAATTGTGGTTACCAATGGCTTTTCTCCTGAAAACAAGTTAGGACAGGGTGGCTTTGGACCTGTTTTTAAGGGAATTCTACCTTCAGGGCAGGAAGTAGCTGTGAAGAAACTATCAAAAACTTCTGGACAAGGAATGACTGAGTTTAGAAATGAATTAACACTCATTTGTAAGCTTCAGCATACAAACCTTGTTCATCTAATCGGTCATTGCATTCATGAACACGAGCGAATATTGATCTATGAGTATATGCCCAACAAAAGCTTGGACTTCTTTTTATTTGATTGGAACAAACGCTTTAACATAATAGAAGGAATTGCTCAAGGATTATTATACCTTCACAAATACTCAAGACTCGGATTTATCCACAGAGATATGAAGGCTAGTAATATTCTCCTTGATGAAAATATGAACCCCAAAATTTCTGATTTTGGTGTGGCAAGAATGTTCACAAAACAAGAAACCGAAGCAAATACCAATAGAATTGTTGGGACATATGGTTACATGTCTCCAGAGTATGCGATGGAAGGAGTTTTTTCTACAAAGTCTGATGTGTATAGTTTCAGAGTGCTGCTCCTTGAAATTATCAGCGGTGAAAAAAACAATAGCTTCTACAGTGAATACAGACCACTTAATCTAGTAGGACATGCATGGGAGTTATGGAAAGAAGGTATGGTTCTTCAGTTGGTGGATTCATCAATAAATGGGTTGTTTTCTGAGGATGAGGTGCTGAGATGTGTTCATGCTGGTTTATTATGCGTAGAAGAAGATGCAGATGATCGTCCCACCATGTCCAGTGTTATATCAATGTTAACAAACAAAATTAAAGTGGATGTTTTGCCTAAAAAACCAGCATACTATAGCAGAACAAGAGTTTTAGAGGAAGAAACGTATGCGGAAGAAGTTGGTTTGGTTTCCACACGTGAAAACTCTCATTCACATGAACAATCAATATAG 2289 0.3731 MKPGDKLNASDTSMLCSKQGRYCMNFDQTPNPKNQTYLSIFGQGKDNWLVWIANRNQSVEKNSAVLSLDYSGELKIESKFGEPIKLYTSPQPFNNSTILVATLLDTGNFILQDIQKKIVLWQSFDHPTDSLLPGMKLGVNRKTSENWSLVSSISDSTLAPGPFRLEWEPTRKELVIKHREKVYWRSGELMENNTFEFISGEDFKVKVESNENEEYFSYTTPNEDGLTKWTLLETGKLINREGNDIARADMCYGYNTNEGCQKWGEAEIPTCRNPGDKFDNKPVYSNENMVYDIENSSYGISDCQAMCWSNCSCFGFKNFYDNGTGCVFLVSTKGLNIAGSGDYLFYILVKNTTDHKEITVSKKGNNNKKWIWICVGMGTVLLIIGLPILFLALRKRKYVLQEKEIMRMQIEIQDLEGSRQYSNGDDIEGDLSNGDDLKVFSYSSIIVVTNGFSPENKLGQGGFGPVFKGILPSGQEVAVKKLSKTSGQGMTEFRNELTLICKLQHTNLVHLIGHCIHEHERILIYEYMPNKSLDFFLFDWNKRFNIIEGIAQGLLYLHKYSRLGFIHRDMKASNILLDENMNPKISDFGVARMFTKQETEANTNRIVGTYGYMSPEYAMEGVFSTKSDVYSFRVLLLEIISGEKNNSFYSEYRPLNLVGHAWELWKEGMVLQLVDSSINGLFSEDEVLRCVHAGLLCVEEDADDRPTMSSVISMLTNKIKVDVLPKKPAYYSRTRVLEEETYAEEVGLVSTRENSHSHEQSI* 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g2168 762 ProSitePatterns Serine/Threonine protein kinases active-site signature. 565 577 IPR008271 GO:0004672|GO:0006468
Mal5g2168 762 ProSiteProfiles Bulb-type lectin domain profile. 1 124 IPR001480 -
Mal5g2168 762 SUPERFAMILY alpha-D-mannose-specific plant lectins 49 151 IPR036426 -
Mal5g2168 762 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 23 760 - -
Mal5g2168 762 Gene3D Transferase(Phosphotransferase) domain 1 528 727 - -
Mal5g2168 762 Pfam Protein tyrosine and serine/threonine kinase 455 715 IPR001245 GO:0004672|GO:0006468
Mal5g2168 762 Gene3D Phosphorylase Kinase; domain 1 419 527 - -
Mal5g2168 762 ProSiteProfiles Protein kinase domain profile. 452 719 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g2168 762 PIRSF SRK 1 251 IPR024171 GO:0004674
Mal5g2168 762 PIRSF SRK 242 761 IPR024171 GO:0004674
Mal5g2168 762 Gene3D - 1 125 IPR036426 -
Mal5g2168 762 SMART blect_4 6 127 IPR001480 -
Mal5g2168 762 Pfam D-mannose binding lectin 50 151 IPR001480 -
Mal5g2168 762 SMART serkin_6 452 708 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g2168 762 Coils Coil 398 418 - -
Mal5g2168 762 SUPERFAMILY Protein kinase-like (PK-like) 436 737 IPR011009 -
Mal5g2168 762 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 23 760 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g2168 Mal-Chr5 52469547 52472942 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g2168 430 749 Receptor kinase-like Gene Family AT3G45860 54.545 1.18e-115 363
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mal5g2168 PK_Tyr_Ser-Thr 1.6e-44 CL0016