Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g2166 ATGGAAGACTTAAACATGTGGCTTTCCTTCTATATGAATGAAAGTGCCAACCTTGATTTCCCTATCAGAAGATTTTGCCCTGCAAGAATGGAGCAAGATCAAGAAGAAGAGTGCCATGACCAAGAGACAGTACTTGATGATGTTGAATTGTATACTTTTGATACTACCACCACTTCTTGTTTATTACCTTCTTCAGAAGTTGATGACTTTGTTGATAGCTTCATCAACATGGATCAATATGAAGATCAAGAGTCTCAAGAGAAGAATCATCATCAAAGTTTTGATCATCACTTTGTGGGGAACGACGATATCTTTGGATATGTTCCAACCATAATGGAGGATGAAGAATTAGAGATCTGTGAAAATACAACAATCACAATGGAGGAGGAGGAGGAGGAAGTTGGAATGAACGTTACTTTTGGTGCTATACCACAATCACAAGTCAGTCTCGGTATGGACCAAGGCCTTGACTTGGTCCATTCGTTGCTGGCTTGTGCTGAGGCCGTTGGTTGCAGAGACAACCATCAGGCCAATTTGTTACTTAGTAAAATTTTGGCTTTGGCAAGTCCTTCAGGAGATTCATTACAAAGAGTCTCCTACTGTTTTGCCATAGCATTGAAGTGTAGGTTATCACTTTCTCCACATAATGTATTTTCAAATAGTACACTCACAACAAGTGCTTCTAATGATGTTTCTTTGATTACTAGGGAGAATAAATTGGAAGCTTTTCAGCTTCTTTACCAAACAACACCTTACATTACTTTTGGTTTCATGGCTGCAAATGAAGCTATATGCCAAGGATCAAAAGGAAAAAGCTCAGTACACATAATTGATTTAGGAATGGAGCATACTCTTCAATGGCCTTCAATTATAAGAAACCTCGCTTCGAGGCTAGACGGGCCTCCAAAGCTCAGGATAACAGGATTCAATACGAACGAAGAAAACAACACAAAACTTCGCGCAAGCATGAATTTGCTTGTAGAGGAAGCATTCTCATTGGGAATAATCCTTGAATTTCGCATAATATCCGAGCCGGCAACTCCTTCTCTTCTTACATTTGAGAACCTCAATGTGAGAGAAGGTGAGTCTTTATTTGTTAATAGCATCTTGAAATTGCACAAATATGTAAAAGAAAGTAGAGGTTATCTTAAGGAAATTCTCCTATCAATCAAGAAGCTAAGTCCAATTGCATTCACAGTTGTAGAGCAAGACACCAACCACAATGGACCTTTTTTTCTTGGTAGGTTTCTAGAATCACTTCACTATTACTCAGCAATATTTGATTCTCTTGAGGCAAGTATGCCAAGAAATAGTCCAATTAGAGTGAAAATAGAGAGAGTACATTTTGCAGAAGAAATTTGTAACATTGTAGCTAATGAGGGTCCTGATAGAATGGAGAGACATGAAAGAGTAGATCAATGGAGAAGACAATTAGGAAGAGCAGGATTTCAGGTAATGCCACTCAAATATACAAGTCAAGCTAGAATGATGCTTTCTGTTTATGATTGTGATGGATATACATTGTCTTGTGAAAAGGGTTGCCTTTTACTTGGTTGGAAAGGAAGGCCTATTATGATGGCTTCTGCTTGGCAAGTGGCAAGTTTGTCATATACTGATAGAGCTTCTTAA 1629 0.3837 MEDLNMWLSFYMNESANLDFPIRRFCPARMEQDQEEECHDQETVLDDVELYTFDTTTTSCLLPSSEVDDFVDSFINMDQYEDQESQEKNHHQSFDHHFVGNDDIFGYVPTIMEDEELEICENTTITMEEEEEEVGMNVTFGAIPQSQVSLGMDQGLDLVHSLLACAEAVGCRDNHQANLLLSKILALASPSGDSLQRVSYCFAIALKCRLSLSPHNVFSNSTLTTSASNDVSLITRENKLEAFQLLYQTTPYITFGFMAANEAICQGSKGKSSVHIIDLGMEHTLQWPSIIRNLASRLDGPPKLRITGFNTNEENNTKLRASMNLLVEEAFSLGIILEFRIISEPATPSLLTFENLNVREGESLFVNSILKLHKYVKESRGYLKEILLSIKKLSPIAFTVVEQDTNHNGPFFLGRFLESLHYYSAIFDSLEASMPRNSPIRVKIERVHFAEEICNIVANEGPDRMERHERVDQWRRQLGRAGFQVMPLKYTSQARMMLSVYDCDGYTLSCEKGCLLLGWKGRPIMMASAWQVASLSYTDRAS* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g2166 542 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 3 534 - -
Mal5g2166 542 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 3 534 IPR005202 -
Mal5g2166 542 Pfam GRAS domain family 158 531 IPR005202 -
Mal5g2166 542 ProSiteProfiles GRAS family profile. 149 531 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g2166 Mal-Chr5 52391697 52393325 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g2166 153 537 GRAS Transcription Factor Family AT2G01570 37.245 1.84e-74 245
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Mal5g2166 GRAS 6.5e-109 CL0063