Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g2141 ATGGCTCTCAAAATTCCGAACACTCCAAACCCATTTCTTCTATCATCATCACCACTAACCCCATCTCTTCAAAATCCAAACTTTTTCACGCTACGCTTCAGCAACCATCGCAGAAAGCTCAAGCTTCGAGCTTCATCTACAGCAGACCCAAATGGCGCTGATGGGTCATCTTGGTCAGAGTCGTTGGACCTGGCTTCGAGGCGGTTTTTGGTGAAATTTGGTGAGTTGGTGAAGAAAGAGACGGGTGTTGATTTGGGAGATGGGATTGGGAAGGCAGGTGAATTTGTGAATGGTGTGAGGAAGGTTGGAAGTGAGTTCAGAACTCCGAGTTTGTCTGAGTTTGTTGATTGGAATCGGTTCGAGAATTGGAAGAATGTCAAGAACTGGGAACCTAGACGAATCGGTGCTTTAGCTCTGTATATATTTGTTGTAGCATTTGCTTGTAGAGGAGTATTTGTAGCAATTCAAGCACCTTTCCTAAACCGTCAGAGGAAAGAATTGACTGAAGCTTACATGGAAGCGTTAATTCCTGAGCCGTCCCCGACTAACATCAGAAGGTTTAAGAAGGGTATGTGGAGGAAGACAATGCCAAAAGGCCTGAAAATGAAAAAGCTCATTGAAAGACCTGATGGAACACTTGTTCATGATACCACTTTTGTTGGAGAGGATGCATGGGAGGATGAGCAGGAATCTTCTGATGAACATGTAAAACAAATTGTAGGGGATGATGAAAGGTTAAATAGTGAGGAGAAGAAAGAATTAATTAAAGACTTGGGCATTTCAGGCAAAGTTCAAACTGAGGGCACATGGCGTGAGAGACTTCATAAATGGAGGGAAATCCTTGGAAAAGAACGTCTTGTTGAGCAATTAAATTCCTTAAATGCCAAATATGCAGTTGAGTTTGACATGAAAGAGGTTGAAAATAGTCTTCGCAAAGAAGTGGCAGAAAAGGCGACAACCACTCAGGGAACAAGGAGTCTGTGGATAGCTAAGAGATGGTGGTGCTATCGGCCTAAACTTCCTTACAATTACTTTCTTGACAAACTTGATAGTTCTGAGGTAGAAGCTGTTGTCTTTACTGAAGACATGAAAAGATTATACATGACAATGAAAGAAGGTTTTCCACGGGAATATATTGTTGATATTCCTCTTGATCCTTATCTTTTTGAGATTATTATGAGTTCTGGTGTGGAAGTAGATCTCCTCCAGAAGCAACAGATCCATTATTTTTTGAAGGTTGCAATTGCATTTTTACCTGGAATACTAATTCTATTTCTTATAAAGCATTCTTTGACCCTTCTGCACATCACTTCCAATCGTTTTCGTTACAAGAAGTACAATCAACTCTTCGATATGGCTTATGCAGAAAATTTCATTCTGCCAGCTGGAGATGCTGGTGAAACAAAATCTATGTCCAAAGAAGTTGTGTTGGGAGGTGATGTTTGGGATCTGCTTGATGAGTTGATGATCTATATGAGAAATCCTATGCAGTTCTATGAAAGGGATGTGAATTTTGTTCGGGGTGTTCTACTCTCTGGACCTCCAGGAACTGGAAAAACACTTTTTGCGAGGACACTTGCAAAACGAAGTGGATTGCCTTTTGTTTTTGCTTCTGGTGCTGAGTTCACAGATAGTGAAAAGAGTGGAGCATCTAGGATTAATGAGATGTTCTCCCTTGCTAGGAGAAATGCACCTTGTTTTGTATTTGTGGATGAAATAGATGCCATTGCTGGAAGACATACTAGGAAGGATCCACGTAGAAGGGCAACGTTTGACGCTCTTGTTACTCAGCTTGATGGAGAGAAGGAAAAAACTGGTATCGACCGACATTCCCTCAGACAAGCGGTCATATTTATCTGTGCCACAAATAGACCAGATGAGTTAGATCTTGAATTTGTTCGACCTGGACGAATTGATCGTCGTCTATACATTGGTTTGCCTGATGCAGAACAAAGAGTCAAAATTTTTGGTGTTCATAGTTCTGGAAAGCAACTTGCGGAGGATGTGAATTTCACAAAGCTTGTCTTCCGTACTGTTGGATTCTCTGGAGCAGATATAAGAAACCTTGTCAATGAAGCAGCAATAATGTCGGTGAGAAATGGGCATCCGAAAATCTTCCAGCAAGACATTACTGATGTTCTAGATAAACAACTGCTTGAGGGTATGGGTGTCCTTATCACCGAGGATGAGCAAAAGAAGTGTGAAGAAAGAGTATCTTTTGAAAAAAAGAGACTGCTTGCTGTACATGAAGCCGGTCATATTGTGCTTGCTCACTTATTTCCTCGGTTTGACTGGCATGCATTTTCACAGCTCCTGCCCGGTGGTAAGGAAACTGCAATATCTGTTTTCTACCCTCGAGAAGATTTGGTAGACCAAGGTTATACAACTTTTGGTTACTTGAAGATGCAAATGGTAGTGGCTCATGGTGGCCGATGTGCTGAACATGTTATATTTGGTGAGAATATTACTGATGGAGGAAGGGATGATCTTGAAAAGATAACAAAGATTGCTCGTGAGATGGTAATCAGCCCTCAAAATAAAAGATTGGGGTTAACAGCTTTAACAAAAAGGGTTGGCTTAGCTGATCGACCAGATACTTTAGATGGTGATTTGATAAGATATAGATGGGATGATCATCAAGTAATTCCTACAAAGATGTCAGTGGAGTTATCTGAGCTCTTTACACGGGAGTTGACAAGGTACATTGAAGAAACTGAAGAACTTGCGATGAATGCTTTGAGGGATAATAAGCACATCCTGGACATGGTTGCAAGAGAACTATTGGAGAAGTCAAGATTAACAGGATTGGAGGTGGAAGAAAAAATGAAACAACTGTCTCCGCCGGTAATGTTTGAGGACTTTGTGAAGCCGTTCCAAGTAGACTTCGAGGAGGACGGACCATTGCCGCATAATGATCGTATACGGTATCGGGCACCTGACTTATACCCTGCTCCTCTCCATAGATGTTAA 2970 0.4148 MALKIPNTPNPFLLSSSPLTPSLQNPNFFTLRFSNHRRKLKLRASSTADPNGADGSSWSESLDLASRRFLVKFGELVKKETGVDLGDGIGKAGEFVNGVRKVGSEFRTPSLSEFVDWNRFENWKNVKNWEPRRIGALALYIFVVAFACRGVFVAIQAPFLNRQRKELTEAYMEALIPEPSPTNIRRFKKGMWRKTMPKGLKMKKLIERPDGTLVHDTTFVGEDAWEDEQESSDEHVKQIVGDDERLNSEEKKELIKDLGISGKVQTEGTWRERLHKWREILGKERLVEQLNSLNAKYAVEFDMKEVENSLRKEVAEKATTTQGTRSLWIAKRWWCYRPKLPYNYFLDKLDSSEVEAVVFTEDMKRLYMTMKEGFPREYIVDIPLDPYLFEIIMSSGVEVDLLQKQQIHYFLKVAIAFLPGILILFLIKHSLTLLHITSNRFRYKKYNQLFDMAYAENFILPAGDAGETKSMSKEVVLGGDVWDLLDELMIYMRNPMQFYERDVNFVRGVLLSGPPGTGKTLFARTLAKRSGLPFVFASGAEFTDSEKSGASRINEMFSLARRNAPCFVFVDEIDAIAGRHTRKDPRRRATFDALVTQLDGEKEKTGIDRHSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAEQRVKIFGVHSSGKQLAEDVNFTKLVFRTVGFSGADIRNLVNEAAIMSVRNGHPKIFQQDITDVLDKQLLEGMGVLITEDEQKKCEERVSFEKKRLLAVHEAGHIVLAHLFPRFDWHAFSQLLPGGKETAISVFYPREDLVDQGYTTFGYLKMQMVVAHGGRCAEHVIFGENITDGGRDDLEKITKIAREMVISPQNKRLGLTALTKRVGLADRPDTLDGDLIRYRWDDHQVIPTKMSVELSELFTRELTRYIEETEELAMNALRDNKHILDMVARELLEKSRLTGLEVEEKMKQLSPPVMFEDFVKPFQVDFEEDGPLPHNDRIRYRAPDLYPAPLHRC* 990
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g2141 989 Gene3D - 466 647 IPR027417 -
Mal5g2141 989 Pfam AAA+ lid domain 668 709 IPR041569 -
Mal5g2141 989 PANTHER ATP-DEPENDENT PROTEASE 25 989 - -
Mal5g2141 989 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 473 716 IPR027417 -
Mal5g2141 989 SMART AAA_5 505 648 IPR003593 -
Mal5g2141 989 CDD AAA 507 646 - -
Mal5g2141 989 Gene3D - 648 721 - -
Mal5g2141 989 Pfam ATPase family associated with various cellular activities (AAA) 509 645 IPR003959 GO:0005524|GO:0016887
Mal5g2141 989 PANTHER ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 12, CHLOROPLASTIC 25 989 - -
Mal5g2141 989 Gene3D Peptidase M41 731 946 IPR037219 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Mal5g2141 989 Pfam Peptidase family M41 738 939 IPR000642 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Mal5g2141 989 SUPERFAMILY FtsH protease domain-like 739 942 IPR037219 GO:0004176|GO:0004222|GO:0005524|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g2141 Mal-Chr5 50665293 50681694 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g2141 5 50665293 50681694 Mal5g2141 5 50665293 50681694 ECH