Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g2070 ATGAAGTACGTTTTGGTGACCGGTGGAGTTGTTAGTGGACTTGGGAAAGGAGTTACTGCTAGCAGCATTGGAGTACTCCTTCAGGCTTGTGGCTTTCGAGTTACTTCTATCAAAATTGATCCCTACCTGAACACTGATGCAGGGACAATGTCTCCTTTTGAGCATGGGGAAGTCTTTGTGTTAGATGATGGTGGTGAGGTTGACCTTGATCTTGGAAACTATGAACGTTTCTTGGACATCAAATTGACTCGCGACAATAATATCACAACTGGGAAAATTTATCAGTCTGTTGTTGAGAAGGAAAGAAGAGGAGACTATCTTGGCAAAACTGTCCAGGTTGTTCCACACATCACAGATGCTATCCAAGAGTGGATAGAACGTGTAGCACAGGTACCAGTTGATGGAAAAGAAGGCCCTGCTGATGTTTGTGTCATTGAATTGGGTGGAACTATAGGTGATATTGAATCTATGCCTTTTATTGAAGCACTTGGCCAATTTTCGTACCGTGTAGGCCCTAGCAACTTCTGTTTGGTTCATGTCAGCCTCGTGCCTGTTCTTAGTGTTGTTGGTGAACAGAAAACAAAACCAACCCAGCACAGTGTCCGTCAACTTAGAGGGTTAGGGTTGATCCCAAATCTTCTTGCTTGTCGCAGTTCAAAGGAACTTGATGATAATGTTAAGGGAAAACTATCTCAATTTTGTCATGTGCCGTTGTCAAACATACTTACTCTCTGTGATGTTCCAAATATTTGGCACATTCCTTTGCTGTTAAGAGACCAGAAGGCGCATGAGGCAATCCTGAAAACGTTAAACCTTCAAGGTGTTGCTACAGAGCCTGATTTTAAGGCGTGGATCACTACAACAAAAGTTTATCACAAATTTCATGAATCTGTTAGAATTGCAATGGTGGGAAAATATACTGGCCTTTCAGATGCATATCTTTCTGTACTGAAGGCACTTCTGCACGCTTCTGTTGCTTGCAACCGCAAGCTAGTTGTGGACTGGGTTCCTGCTGGGGATCTTGAAGATGATACCTTAAAAGAGAATCCTGATGCATATAAAGCTGCTTGGAGTCTTTTAGAGGGTGCTAATGGAATTCTAGTTCCGGGAGGTTTTGGTGATAGGGGAGTGCAAGGGAAAACTCTTGCTGCTAAGTATGCTCGAGAAAATAGTGTTCCGTTTCTTGGCATTTGCTTGGGGATGCAAATTGCTGTCGTTGAATTTGCAAGATCTGTTCTGGGTCTTCACGATGCTAATAGCACTGAATTTGATCCCAAAACCAAAAATCCTTGTGTCATATTTATGCCAGAAGGTTCAAAGACCCATATGGGTGGAACTATGCGTCTTGGTTCAAGGAGAACTTACTTTCAGGTTGCTGACTGCAAATCAGCCAAGTTGTATGGAAATGCAAGCTTTGTCGATGAGCGACATCGCCATAGATACGAGGTTAATCCTGACATGATATCAGAACTTGAGAATGCTGGTCTAACTTTTGTTGGCAAAGATGAAACTGGGAGGCGTATGGAGATAGTTGAAATGCCTGGTCATCCTTTCTTTATTGGTGCTCAGTTCCACCCTGAGTTTAAGTCGAGACCAGGGAAACCTTCTCCACTATTCTCAGGATTACTAGAAGCAGCATGTGAGAGGACAGCTGTGTCAAATAACAAAGGAAATGCAAATTTAATCAATGGGATACATGGACCACACTCGCCAACGTCGAAAGCACAGAATGGGAATGGGTTCAAATCTACCAATGGTTCCTTAAACGGTGCAAGTCCTAATGGCAATGTCGTATAA 1797 0.429 MKYVLVTGGVVSGLGKGVTASSIGVLLQACGFRVTSIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFLDIKLTRDNNITTGKIYQSVVEKERRGDYLGKTVQVVPHITDAIQEWIERVAQVPVDGKEGPADVCVIELGGTIGDIESMPFIEALGQFSYRVGPSNFCLVHVSLVPVLSVVGEQKTKPTQHSVRQLRGLGLIPNLLACRSSKELDDNVKGKLSQFCHVPLSNILTLCDVPNIWHIPLLLRDQKAHEAILKTLNLQGVATEPDFKAWITTTKVYHKFHESVRIAMVGKYTGLSDAYLSVLKALLHASVACNRKLVVDWVPAGDLEDDTLKENPDAYKAAWSLLEGANGILVPGGFGDRGVQGKTLAAKYARENSVPFLGICLGMQIAVVEFARSVLGLHDANSTEFDPKTKNPCVIFMPEGSKTHMGGTMRLGSRRTYFQVADCKSAKLYGNASFVDERHRHRYEVNPDMISELENAGLTFVGKDETGRRMEIVEMPGHPFFIGAQFHPEFKSRPGKPSPLFSGLLEAACERTAVSNNKGNANLINGIHGPHSPTSKAQNGNGFKSTNGSLNGASPNGNVV* 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g2070 598 ProSiteProfiles Glutamine amidotransferase type 1 domain profile. 299 552 - -
Mal5g2070 598 Gene3D - 294 558 IPR029062 -
Mal5g2070 598 CDD CTPS_N 2 268 IPR017456 GO:0003883|GO:0006221
Mal5g2070 598 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 272 IPR027417 -
Mal5g2070 598 TIGRFAM PyrG: CTP synthase 1 545 IPR004468 GO:0003883|GO:0006221
Mal5g2070 598 PANTHER CTP SYNTHASE 1 572 - -
Mal5g2070 598 Pfam Glutamine amidotransferase class-I 309 544 IPR017926 -
Mal5g2070 598 MobiDBLite consensus disorder prediction 565 598 - -
Mal5g2070 598 Pfam CTP synthase N-terminus 2 272 IPR017456 GO:0003883|GO:0006221
Mal5g2070 598 Hamap CTP synthase [pyrG]. 1 550 IPR004468 GO:0003883|GO:0006221
Mal5g2070 598 PANTHER CTP SYNTHASE 1 572 IPR004468 GO:0003883|GO:0006221
Mal5g2070 598 CDD GATase1_CTP_Synthase 298 543 IPR033828 GO:0003883|GO:0006241
Mal5g2070 598 Gene3D - 1 293 IPR027417 -
Mal5g2070 598 SUPERFAMILY Class I glutamine amidotransferase-like 297 549 IPR029062 -
Mal5g2070 598 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g2070 Mal-Chr5 47321330 47327884 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g2070 5 47321330 47327884 Mal5g2070 5 47321330 47327884 ECH
Mal4g2087 4 47037033 47040876 Mal5g2070 5 47321330 47327884 PCT