Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g2066 ATGCTCTACCACAACACAAAAGCCATGTTTCATTTCTTGCTACTAGCATCCATGATAGTTGGGATTGGAATGTCAGATTCATCCAAAGACAAACAAGAATGCACAACTCAATTAACAGGGCTAGCAGCATGCCTCCCCTATGTTGAAGGTGAAGGAAAATCTCCAGCACCAGATTGTTGTGATGGTCTCAAGACACTTCTGAAGACAAACAAGAAGTGTTTGTGTCTAATTATAAAAGATCGTAATGATCCTGATTTGGGTGGTATAGTAATTAATGTCACTTTGGCTTTGAATCTTCCAACAGTTTGTAATGCCCCTGCCAATATCTCAAAGTGTCCTGAGCTGCTACACATGGATCCCAAATCAGCTGAGGCTCAAGTTTTTTATCAATTGAACAATGGCTCCACCAATATTAGCCCAAGTGCTGCACCTAGTCCTTCAGATGGAGCAAGCAGCCAAGCAAGAAGTACTACACAGAAGAATGATGCATTCAGCAGAGAGAAGAGATTGATTGGGTTAAACGTTTTGGCTTTTGGACTTTTAGTTTGGTTTTTACTTGGCTCTGCTGCTGGAAACTTTTTCATTTGA 588 0.4082 MLYHNTKAMFHFLLLASMIVGIGMSDSSKDKQECTTQLTGLAACLPYVEGEGKSPAPDCCDGLKTLLKTNKKCLCLIIKDRNDPDLGGIVINVTLALNLPTVCNAPANISKCPELLHMDPKSAEAQVFYQLNNGSTNISPSAAPSPSDGASSQARSTTQKNDAFSREKRLIGLNVLAFGLLVWFLLGSAAGNFFI* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g2066 195 SMART aai_6 34 112 IPR016140 -
Mal5g2066 195 Gene3D - 31 112 IPR036312 -
Mal5g2066 195 Pfam Probable lipid transfer 16 112 IPR016140 -
Mal5g2066 195 CDD AAI_LTSS 41 104 - -
Mal5g2066 195 MobiDBLite consensus disorder prediction 139 161 - -
Mal5g2066 195 MobiDBLite consensus disorder prediction 139 160 - -
Mal5g2066 195 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 16 185 IPR043325 -
Mal5g2066 195 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 32 113 IPR036312 -
Mal5g2066 195 PANTHER PROTEIN YLS3-LIKE ISOFORM X1 16 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g2066 Mal-Chr5 47097760 47098788 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g2066 26 186 Acyl Lipid Metabolism Gene Families AT2G44300 50.000 1.98e-57 178