Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g2065 ATGGGCGTGGTAATAATAGACGGCACCACCGTGCGAGACTTCATCGCCGACGACACACGTTTCACAAACAGCGTCAACGAACAATTCTCCTCACTCGATCTCAACAACGACGGTGTTCTATCACGCGCCGAGCTTCGCAAAGCTTTCGAATCCATGAGACTCATCGAATCTCACTTCGGCATCGACGTGAAAACTCCGCCGGAGCAGCTCACGCGCCTCTACGACTCCGTTTTCGACACTTTCGACGGAGATGGAAGCGGAACTGTTGATCGTGAGAAGTTTAAGAATGAGATGAAGAAGATTATGCTTGCTATTGCGGATGGATTGGGTTCTTCGCCTATTCAAATGGTTCTTGAAGATGATGATTCCATGAGTCTTCTTCAGAAAGCTGCTGATCTTGAAGCTTCTAAGAACTCCTCTGCCGTTTGA 429 0.4848 MGVVIIDGTTVRDFIADDTRFTNSVNEQFSSLDLNNDGVLSRAELRKAFESMRLIESHFGIDVKTPPEQLTRLYDSVFDTFDGDGSGTVDREKFKNEMKKIMLAIADGLGSSPIQMVLEDDDSMSLLQKAADLEASKNSSAV* 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g2065 142 SMART efh_1 24 52 IPR002048 GO:0005509
Mal5g2065 142 SMART efh_1 73 101 IPR002048 GO:0005509
Mal5g2065 142 ProSiteProfiles EF-hand calcium-binding domain profile. 69 104 IPR002048 GO:0005509
Mal5g2065 142 ProSiteProfiles EF-hand calcium-binding domain profile. 20 55 IPR002048 GO:0005509
Mal5g2065 142 PANTHER CALCIUM-BINDING EF-HAND FAMILY PROTEIN 1 138 - -
Mal5g2065 142 Gene3D - 13 106 - -
Mal5g2065 142 PANTHER CALCIUM-BINDING EF-HAND FAMILY PROTEIN-RELATED 1 138 - -
Mal5g2065 142 Pfam EF-hand domain pair 26 98 IPR002048 GO:0005509
Mal5g2065 142 ProSitePatterns EF-hand calcium-binding domain. 33 45 IPR018247 -
Mal5g2065 142 SUPERFAMILY EF-hand 23 100 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g2065 Mal-Chr5 47094320 47094748 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g2065 1 141 EF-hand Containing Proteins AT2G44310 68.085 9.66e-66 194