Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g2052 ATGCCATTCTCATATGTCAAAAAATCTTTCAAGATGCTTTGGGTTGATGAATTTCAAACTGGTATGTTACCATCTCTTGGAGAAAGAGTTAACCAAGAAACTAAACTAAGAAGATACATAATCTCTCCCTTCAATGCAAATTACTGGGCTTGGGACAAGTGGTTGATAATTCTAGTGCTTTACTCTGCATGGATATGCCCCTTTCAATTTGCTTTTCTTCCCTATAAGCATGACACACTATTCATCATAGATAACATTGTGAATGGTTTCTTTGCAATTGACATAGTGATGACATTCTTTGTTGCATATCTTGATAACCATTCTTACCTTCTTATTGATGATCATAAGAAAATTGCAAAAAGGTACCTATGTACCTGGTTTGTCTTTGATGTTTGTTCAACTGCACCTCTTCAAACAATTAGCTCCTTCTTCACTGATCAGAGCGGCGATTTTGGATTCAAAATTCTTGACATGCTTCGTTTATGGCGTCTGAGACGAGTCAGTTCTCTCTTTGCAAGCCTTGAGAAGAACATTCGCTGGAATTACTTTTGGATTAGGTGTTTAAAACTCAGTGCCGTGACATTGTTTGCAGTACACTGTGCTGGATGCTTTAACTATTTACTTGCAGATACTTACCCTGATTCAAAAAGTACATGGATTGGTGCAGTGTACCCAAATTTTAAAGAAATGAGTCTTTGGGATAGATATGTGACATCCATGTATTGGTCAATTGTCACGCTAACTACAACTGGATATGGAGATTTGCATGCCAATAACACTAGAGAGATGCTCTTTGACATTGGTTACATGTTGTTCAACTTGGGATTAACAGCTTACATCATTGGAAACATGACAAATCTTGTTGTTCAATGGACAAGCCACACAAGACATTTTAGAGATACAGTTAGAGCAGCAACAGAATTTGCATCAAAAAATCATCTGCCTCATGATACGCAAGATCAAATACTATCACACTTATGTCTGAAATTCAAAACAGAAGGATTAAAACAGCAAGAAACAATAAATGGCATGCCAAAAGCAATTCGTGCAAGCATTGCACAACATCTTTTTTATCCTGTGGTGCAGAAATCCTACCTCTTCCAAAGAGTTTCACATGATTTTCTATTTCAACTGGTTACAGAAATAGAAGCTGAGTATTTTCCACCTAAAGAAGATGTTATGCTGCAAAATGAGTCTCCAACAGATCTTTACATGGTGGTCTCAGGGGCTGTGGATCTCATTCGCAATGTTGATGGTCATGATCAAGTTTTGAAGAAGGCAAATGCAGAAGATACATTTGGAGAGATTGGAGTTTTATACAATAAACCACAACCTTTCACTGTTAGGACCAAAGAGCTTTCACAAATTTTAAGACTTAGCAGAACTTCATTGATGAACGCTATACATGCAAATCCAGAAGCAGCACCAATTATAATGTCAAATCTTTTTATGATGTTAAATGGTCTAGAAGATTTGGGTTTTAAATATCCACCTACTAGATTGTCTCTTCATGACATGAATGGTGGAAACAACATAAGGGGAGATTCATATGATGAATGTGCAAAAGATTCACATGGGGAAGACATATTACATGACATGATACCTAACATGATTGAAAATCAGCAAGAAAAAGAAGCAAATGAAAAGAAGCTAAGTCCTGTTAGATGGAAACAGAAATCTCAAGAAGACAAGCAACAAAACAAGAGTCATGAAAATGGAAAGACATTAGATGAACATATAATAGAGTTTATGGAGACAGATAACCTTAGCTATGTTAGGAGTGACCAAAATTCATTAGGAAGTAATCATCCAATTGAAAGAAAAAAAGCAATTTTTGTGGATAAGAGAGTTACCATTCATTATCTTGGCCAAGACAGAACCACCGCACAAGGACAACATGGGAAGTTGATAATTCTACCTGATTCATTGGAAGAGCTGCTCAAGATTGTTGGAGAAAAGTTTGGAGGGTCGAAGCCTACAAAAATAGTAAATTCAGAGAATGCGGAGATAGATGACATGTGTGTCATTCGAGATGATGCAGATCATAATGAATGCACAAACAAAGGAATGAAAGAAACTTGCTGCTAG 2088 0.3659 MPFSYVKKSFKMLWVDEFQTGMLPSLGERVNQETKLRRYIISPFNANYWAWDKWLIILVLYSAWICPFQFAFLPYKHDTLFIIDNIVNGFFAIDIVMTFFVAYLDNHSYLLIDDHKKIAKRYLCTWFVFDVCSTAPLQTISSFFTDQSGDFGFKILDMLRLWRLRRVSSLFASLEKNIRWNYFWIRCLKLSAVTLFAVHCAGCFNYLLADTYPDSKSTWIGAVYPNFKEMSLWDRYVTSMYWSIVTLTTTGYGDLHANNTREMLFDIGYMLFNLGLTAYIIGNMTNLVVQWTSHTRHFRDTVRAATEFASKNHLPHDTQDQILSHLCLKFKTEGLKQQETINGMPKAIRASIAQHLFYPVVQKSYLFQRVSHDFLFQLVTEIEAEYFPPKEDVMLQNESPTDLYMVVSGAVDLIRNVDGHDQVLKKANAEDTFGEIGVLYNKPQPFTVRTKELSQILRLSRTSLMNAIHANPEAAPIIMSNLFMMLNGLEDLGFKYPPTRLSLHDMNGGNNIRGDSYDECAKDSHGEDILHDMIPNMIENQQEKEANEKKLSPVRWKQKSQEDKQQNKSHENGKTLDEHIIEFMETDNLSYVRSDQNSLGSNHPIERKKAIFVDKRVTIHYLGQDRTTAQGQHGKLIILPDSLEELLKIVGEKFGGSKPTKIVNSENAEIDDMCVIRDDADHNECTNKGMKETCC* 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g2052 695 SUPERFAMILY Voltage-gated potassium channels 46 289 - -
Mal5g2052 695 SUPERFAMILY cAMP-binding domain-like 293 482 IPR018490 -
Mal5g2052 695 Gene3D - 52 290 - -
Mal5g2052 695 PANTHER POTASSIUM CHANNEL KAT1 1 681 - -
Mal5g2052 695 SMART cnmp_10 366 483 IPR000595 -
Mal5g2052 695 PRINTS EAG/ELK/ERG potassium channel family signature 84 94 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mal5g2052 695 PRINTS EAG/ELK/ERG potassium channel family signature 61 68 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mal5g2052 695 PRINTS EAG/ELK/ERG potassium channel family signature 95 104 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mal5g2052 695 PRINTS EAG/ELK/ERG potassium channel family signature 236 253 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mal5g2052 695 PRINTS EAG/ELK/ERG potassium channel family signature 262 273 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mal5g2052 695 PRINTS EAG/ELK/ERG potassium channel family signature 280 289 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mal5g2052 695 ProSiteProfiles KHA domain profile. 616 695 IPR021789 -
Mal5g2052 695 PANTHER POTASSIUM CHANNEL AKT1 1 681 IPR045319 GO:0005249|GO:0006813
Mal5g2052 695 Pfam Ion transport protein 51 295 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Mal5g2052 695 Pfam Cyclic nucleotide-binding domain 386 469 IPR000595 -
Mal5g2052 695 ProSiteProfiles cAMP/cGMP binding motif profile. 366 485 IPR000595 -
Mal5g2052 695 Gene3D Jelly Rolls 333 491 IPR014710 -
Mal5g2052 695 MobiDBLite consensus disorder prediction 543 576 - -
Mal5g2052 695 CDD CAP_ED 366 475 IPR000595 -
Mal5g2052 695 Pfam KHA, dimerisation domain of potassium ion channel 615 679 IPR021789 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g2052 Mal-Chr5 46509324 46516213 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g2052 1 682 Ion Channels AT5G46240 58.106 0.0 806