Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g2038 ATGCTGATATTAGTTCTAGGACTAACTTCAGCTACTTTGTTAGTGATTGTTGCAATTTATGGCTATTGTTACATAAAAAGATCAACAAAACATGAGATGAAAGACATAGAAAGCTTGGAAGAAAAGCATGAGGAGGTGAAGGAGGATTTGATCATCTTTGAAGGTGGAGAGGATTTGACAATATGTGATATATTGGATGCACCAGGAGAAGTGATTGGAAAATCAAATTATGGAACACTTTATAAGGCTTTGTTGCAAAGGAGTAATAAAGTGAGGTTACTAAGGTTTTTGAGACCTGTTTGTACTACAAGAGGTGAAGAATTGGATGAAATGATTTTGTTTCTTGGAAGATTAAAGCATCCTAATTTGGTTCCTCTTTTGGGATTTTATACTGGACCAAGGGGTGAGAAGCTTCTTGTTCATCCATTTTATAGGCATGGGAATCTTACTCAATTCATAAGAGATGGAAATGGAGAGAGTTACAAATGGTCAAACATATGTACAATATCAATTGGTATAGCAAAAGGATTAGAACATCTTCACACATCACATGAAAAACCAATTATCCATGGAAACCTGAAGTCGAAAAACATCCTTTTGGACAGTTCCTATCAACCACATATCTCAGATTCAGGACTCCATCTTCTGTTGAATCCAACTGCTGGCCAAGAAATGCTTGAAAGTTCATCTGCTCAAGGCTATAAACCACCTGAACTAATCAAAATGAAGGATGCTAGCGAAGAAACCGATATATATAGCCTCGGTGTTATCTTGCTTGAATTGCTTTCAGGAAAGGAACCTATCAATGAACATCCAACTCCTGATGAGGATTTCTATTTGCCGAATTTCATGAGAAATGCTGTTCTTGGACATAGAATTTCTGATTTATATCATCCTGCTATTCTTCTCAGAAACGGCATAGACGATGAAAATCAAGTTACCGAAGAATGTGTTCTCAAATTTTTTCAACTTGCTATGGCTTGTTGTTCACCTTCACCTTCAATTAGACCTAACATAAAGCAAGTTATTAGGAAGCTTGAAGAAATTATACATTAG 1056 0.3608 MLILVLGLTSATLLVIVAIYGYCYIKRSTKHEMKDIESLEEKHEEVKEDLIIFEGGEDLTICDILDAPGEVIGKSNYGTLYKALLQRSNKVRLLRFLRPVCTTRGEELDEMILFLGRLKHPNLVPLLGFYTGPRGEKLLVHPFYRHGNLTQFIRDGNGESYKWSNICTISIGIAKGLEHLHTSHEKPIIHGNLKSKNILLDSSYQPHISDSGLHLLLNPTAGQEMLESSSAQGYKPPELIKMKDASEETDIYSLGVILLELLSGKEPINEHPTPDEDFYLPNFMRNAVLGHRISDLYHPAILLRNGIDDENQVTEECVLKFFQLAMACCSPSPSIRPNIKQVIRKLEEIIH* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g2038 351 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 2 349 - -
Mal5g2038 351 Coils Coil 29 49 - -
Mal5g2038 351 Gene3D Phosphorylase Kinase; domain 1 67 143 - -
Mal5g2038 351 SUPERFAMILY Protein kinase-like (PK-like) 69 347 IPR011009 -
Mal5g2038 351 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 2 349 - -
Mal5g2038 351 Gene3D Transferase(Phosphotransferase) domain 1 145 351 - -
Mal5g2038 351 Pfam Protein tyrosine and serine/threonine kinase 70 346 IPR001245 GO:0004672|GO:0006468
Mal5g2038 351 ProSiteProfiles Protein kinase domain profile. 66 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g2038 Mal-Chr5 45785592 45787904 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g2038 35 349 Carbohydrate Esterase AT5G61570 62.154 3.19e-140 400
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Mal5g2038 PK_Tyr_Ser-Thr 9.1e-31 CL0016