Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g1996 ATGAACACTTCCATTATCGACCCGTTGCAGGGTGATTTCCCAGAAGTGATAGAAGAATATTTGGAGCATGGGATTATGAAATGTATTGCTTTCAATCGTCGTGGTACCCTTCTTGCTGCTGGCTGCAATGATGGAAGTTGTGTCATCTGGGATTTTGAAACCAGGGGAATTGCTAAAGAGCTTCGAGATAATGAATGTTCGTCTCCTATCACCAGTATCTGTTGGTCAAAGTGTGGTAATCGAATTCTTGTATCTGCTGCTGATAAGTCGTTATCCCTATGGGATGTTTTGAGTGGTAAGCGGATAACAAGAATAGTTTTACAGCAAACCCCTTTACAAGCCCGGCTTCATCCGGGGTCCTCCAAACCATCTCTCTGCTTGGCGTGTCCTCTCTCATCTACTCCGATGATTGTTGACTTAAACACCGAAGATACAACTTTTCTTAAAGTTTCTGTCTCTGAGAAACCAAGTGGACCTAACCCTGCCTCACGCAACAAGTGTTCTGATGGAAGCACCTCCTTCACACCTACTGCTGCATGTTTTAGTAAGTATGGAAACCTGGTTTATGTGGGAAACTCAAAAGGTGAAATTCTTTTAATTGACAGTAAAGATGGTGAGGTGCGTGCCATGGTTCCTATCTCTGGTGGTTCGGTAGTGAAGAACATTGTATTCAGCAGGAATGGACAGTATCTTCTAACGAACTCAAATGATCGAGTTATCAGGATCTATGAAAATCTTCTGCCCCCGAAAGATGAAGTTAGAGCACTAAATGAACTGAATGAGAACCTCAGTGATCTAACTGGTGTTGAGAAGTTGACGGCTGTAGGATCAAAATGTTTAACTTTGTTCCGTGAGTTTCAAGATGCAATCACGAAGGTGCACTGGAAGGCACCCTGTTTCAGCGGTGATGGTGAGTGGGTTGTTGGTGGTTCTGCTAGCAAAGGAGAGCACAAGATTTACATATGGGATAGAGCTGGACATCTTGTGAAAATCCTTGAAGGGCCTAAGGAAGCTCTTATTGATTTAGCTTGGCATCCTGTACGTCCTATTGTTGTGTCTGTTTCTTTGACTGGCATAGTTTATATCTGGGCCAAAGATTACACTGAGAACTGGAGTGCTTTTGCTCCTGATTTCAAAGAGCTTGAGGAAAACGAGGAGTATGTGGAGCGAGAAGATGAATTTGATTTGAATCCTGAGACTGAGAAGGTAAAAGGATCTGATGTCAATGAAGATGAGGAAATTGACATTGTGACAGTCGAGAAGGATCCTGCTTTCAGTGACTCTGATATGTCAGAGGAAGAGTTATGTTTCTTGCCAGCATCTCCCTGTCCTGATGTTCCTGAACAGCAAGACAAGTTCTTAGAAAGTTCTTCAAAGCTGGGGGACAGCAATTACTCTGGATCTCCTTTTTCGGAAGAAGTGGTAGCAAATGGACATATGATGAATCATGCCTCAAGTCCAGTTGAAGATGATGCTGTGGGAACACGGATTAGAAGAAAGCGGAAACCATCAGAGAAGGTGTTGGAGTTGCAGGCAGAACAAGTCAAGAAACCCTCAAAATCTAGCAAATCATCAAAAACCAAAAGTAATGGCAATGATTTTTATTATGATGAGCTTTCTGATGAATAA 1629 0.426 MNTSIIDPLQGDFPEVIEEYLEHGIMKCIAFNRRGTLLAAGCNDGSCVIWDFETRGIAKELRDNECSSPITSICWSKCGNRILVSAADKSLSLWDVLSGKRITRIVLQQTPLQARLHPGSSKPSLCLACPLSSTPMIVDLNTEDTTFLKVSVSEKPSGPNPASRNKCSDGSTSFTPTAACFSKYGNLVYVGNSKGEILLIDSKDGEVRAMVPISGGSVVKNIVFSRNGQYLLTNSNDRVIRIYENLLPPKDEVRALNELNENLSDLTGVEKLTAVGSKCLTLFREFQDAITKVHWKAPCFSGDGEWVVGGSASKGEHKIYIWDRAGHLVKILEGPKEALIDLAWHPVRPIVVSVSLTGIVYIWAKDYTENWSAFAPDFKELEENEEYVEREDEFDLNPETEKVKGSDVNEDEEIDIVTVEKDPAFSDSDMSEEELCFLPASPCPDVPEQQDKFLESSSKLGDSNYSGSPFSEEVVANGHMMNHASSPVEDDAVGTRIRRKRKPSEKVLELQAEQVKKPSKSSKSSKTKSNGNDFYYDELSDE* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g1996 542 MobiDBLite consensus disorder prediction 456 542 - -
Mal5g1996 542 Gene3D - 266 384 IPR015943 GO:0005515
Mal5g1996 542 MobiDBLite consensus disorder prediction 456 471 - -
Mal5g1996 542 ProSitePatterns Trp-Asp (WD) repeats signature. 38 52 IPR019775 -
Mal5g1996 542 SUPERFAMILY WD40 repeat-like 24 363 IPR036322 GO:0005515
Mal5g1996 542 ProSiteProfiles Trp-Asp (WD) repeats profile. 67 104 IPR001680 GO:0005515
Mal5g1996 542 Pfam WD domain, G-beta repeat 22 51 IPR001680 GO:0005515
Mal5g1996 542 Pfam WD domain, G-beta repeat 279 323 IPR001680 GO:0005515
Mal5g1996 542 Pfam WD domain, G-beta repeat 68 95 IPR001680 GO:0005515
Mal5g1996 542 Gene3D - 22 265 IPR015943 GO:0005515
Mal5g1996 542 MobiDBLite consensus disorder prediction 492 513 - -
Mal5g1996 542 PANTHER RETINOBLASTOMA-BINDING PROTEIN 5 1 529 IPR037850 GO:0048188
Mal5g1996 542 ProSiteProfiles Trp-Asp (WD) repeats profile. 26 60 IPR001680 GO:0005515
Mal5g1996 542 MobiDBLite consensus disorder prediction 152 172 - -
Mal5g1996 542 SMART WD40_4 204 244 IPR001680 GO:0005515
Mal5g1996 542 SMART WD40_4 276 323 IPR001680 GO:0005515
Mal5g1996 542 SMART WD40_4 13 51 IPR001680 GO:0005515
Mal5g1996 542 SMART WD40_4 325 364 IPR001680 GO:0005515
Mal5g1996 542 SMART WD40_4 54 95 IPR001680 GO:0005515
Mal5g1996 542 SMART WD40_4 161 201 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g1996 Mal-Chr5 43926288 43933475 Tandem