Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g1992 ATGCATAATCCAAAATCTGCAGCGTCTTTCCTCTTACCACACACCAAATTTCTTCAACTTCTTCACCACAACAACTTTCTTTTGCTCGCTTCGACTTCACGCTCACTGTTATTCAACATTCAACCGTCGCTTTCTTTTTTTTCATCTAATGCTCAACACTCGTATGATGATCATGATGATGAGGTATCGTCTACGGTGGCCAATGTAAATGAGTGGAATGGGAGACTTATTACGTTCTTACAGAACGAAAAGGATCAGGAGATTGTATCTAGAGACAAAAGAGATAAGAGAGACTATAAACAAATAGCTGACCTAGCCAAAAGAATTGGACTTTACAGTCAGCTGTTTGGGAATATAGTTGTTGCAAGCAAGGTGCCTCTTCCTAACTACCGACCAAATTTGGATGAAAACCGTCCACAAAATGAGGCATCGTATACGGCGGTCAATGAGAATGAGTGGAACTGGAAACTTATTATGTTGTTACAGAACGAAAAGGATCAGGAGATTGTATCTAGAGACAAAAGAGATAAGAGAAACTATGAAGAAATAGCTGCTCTTGCCAAAAGAATGGGACTTTACAGTAAGCAGTTTGGGAATATAGTTGTTGTAAGCAAGGTGCCTCTTCCTAACTACCGACCAGATTTGGATGAAAACCGTCCACAAAGAGAGGTTGTGATTCCACTAAGTTTGCAAAGGAGGGTGGAGGGTTTGGTGCAGGAGTACCTTAGACTACAACTAAATTCTGAAAAGACAACCGACTCTCTGGATAATGTGAATTCCACCAATCAGGTTGAAGATATTGATATGGATGTAGATGACTATTCTTTTGTGGATGAATCTGTTACGGAAACGGTTCTCCGGAAGAGGAGTTTGAAGATGCGAACTATGCAAAGATCTTGGCAGGCATCATCTGAAGGAAAGGAGATGCTCGAATTCCGGAAGTCTCTACCAGCATTTAGGGAGAAGGAAGCTTTGCTTCAAGCTATAGAACATAATCAGGTAGTAGTTATATCTGGAGAGACTGGATGTGGTAAAACTACTCAAGTTCCTCAGTATTTATTAGAGTCCGAGATAGAGTCCGGCCGTGGGGCATTTTGCAGCATTATTTGCACACAGCCTCGAAGGATATCTACTATGGCAGTGTCTGAGAGAGTTTCAGCAGAGAGAGGAGAGTCTCTGGGTGATACAGTTGGTTTCAAAGTTCGGTTAGAAGGATCGAGAGGGGAAAACACCCATCTGCTATTTTGTACTAGTGGTATATTACTCCGAAAGTTGCTGATTGACCCGAACCTGAGTGGTGTAACCCATGTGTTTGTGGATGAAATTCACGAGCGAGGCATGAATGAAGATTTCTTACTGATTGTGTTGAAGGATCTTCTTCCTCATCGTCCTGATTTAAGATTGGTGTTGATGAGTGCCACTTTGAATGCTGATCTTTTTTCAAAATATTTTGGAGGTGCACCAACATTTCATATCCCGGCTGTTCTATATCATATTTGTGATATAAGGTGTTTAAGAAATAAGCTTAGAGAACATTCTCTTTTAGGAGACCCCAGTAGGGTTCTGCTTCAAACATGCCATGGTTCAATGGAAACTTTTGAGCAGAAACTCATCTTTGATAAACCACCTCCAAATGTAAGGAAAATAGTAATTGCTACAAATGTCGCAGAGGCAAGCATTACGATCAATGACATAGTTTTTATCGTAGACTGTGGAAAAGCAAAAGAGACCAGTTATGATGCCTTGAATAACACACCATGTCTATTACCTTCTTGGATTTCAAAAGCATCTGCACGTCAGAGAAGAGGTAGGGCGGGTCGTGTGCAGCCAGGAGAATGCTACCACCTTTACCCCAAATGTGCTTATGAAGCCTTTTCTGAATATCAACTTCCTGAAGTTATGAGAACACCCTTGAACTCTCTTTGCTTGCAAATTGAGAGCATTGCAGAATTCTTATCATCAGCTTTGCAGGTACCGGAGCCACGTGCCGTCCAAAATGCTATTGATTTTCTCACAATAATTGGAGCATTTGATGAACAAGAAAATCTTACCAATCTTGGGAATTTTCTCTCAGTACTTCCTGTAGATCCCAAGCTGGGAAAAATGCTGATAATGGGAGCTATATTTCGGTGCTTTGATCCTGTTCTTACAATAGTTGCTAGCCTTAGTGTCAGGGATCCTTTTCTTTTGGCCCTAGACAACAGAGATTTAGCATGGATGGCAAAGTGTAGGTTTTCTGCTAAAGATTACAGTGATCATATGGTTTTTGTTCGAGCATATGAAGGATGGAAAGATGCTAAGAGAAAAGGATCAGCTCATGAATACTGCTCAATAAATTTTCTTTCTTCCCAAACTCTTCAATCAATTCATTTAATTCGGAAACAGTTCAGCTTCATCTTGAAAGAAGTTGGCTTGGTAGATACAGATGCAAACATTAATAACGAATTGAGCCATAATCAATCTCTTGTACGTGCAGTCATATGTTCTGGACTCTTTCCTGGTGTAGCATCGGTGGTGCGTACGAAAATTAAGACAATGGATGATGACCACGTTTTATTGCATGCAAGTTCAGTGAACGAACGTAACCAGACTATTCCTTACCCGTGGTTGGTTTTAAATGAGAAACTAAAGATCAAGGACGTTAACATCCAAGATTCCACTGGTGTATCTGATTCAATACTTATCCTATTTGGTGGTGCTCTAAGTAATGGGATACAGGCGGGGCATCTGAAAATGTTGGATGGGTACATTGACTTATTTATGGATCCTAATTTAGCCGACTGCTATTTGAAGCTTAAGGGTGAACTAGATAAGCTTATCCAAAAGAAGCTAGAAGATCCTGGAATTGACATTCACAAGGAAGGGAAGTACTTGATGCTTGCTGTTCAGGAATTGGTATTAGGGGATCAGTGTGAAGGAAGATTTGTATTTGGCCGTGACTGCCGGAAGCCTAATGACGAATGA 2964 0.4069 MHNPKSAASFLLPHTKFLQLLHHNNFLLLASTSRSLLFNIQPSLSFFSSNAQHSYDDHDDEVSSTVANVNEWNGRLITFLQNEKDQEIVSRDKRDKRDYKQIADLAKRIGLYSQLFGNIVVASKVPLPNYRPNLDENRPQNEASYTAVNENEWNWKLIMLLQNEKDQEIVSRDKRDKRNYEEIAALAKRMGLYSKQFGNIVVVSKVPLPNYRPDLDENRPQREVVIPLSLQRRVEGLVQEYLRLQLNSEKTTDSLDNVNSTNQVEDIDMDVDDYSFVDESVTETVLRKRSLKMRTMQRSWQASSEGKEMLEFRKSLPAFREKEALLQAIEHNQVVVISGETGCGKTTQVPQYLLESEIESGRGAFCSIICTQPRRISTMAVSERVSAERGESLGDTVGFKVRLEGSRGENTHLLFCTSGILLRKLLIDPNLSGVTHVFVDEIHERGMNEDFLLIVLKDLLPHRPDLRLVLMSATLNADLFSKYFGGAPTFHIPAVLYHICDIRCLRNKLREHSLLGDPSRVLLQTCHGSMETFEQKLIFDKPPPNVRKIVIATNVAEASITINDIVFIVDCGKAKETSYDALNNTPCLLPSWISKASARQRRGRAGRVQPGECYHLYPKCAYEAFSEYQLPEVMRTPLNSLCLQIESIAEFLSSALQVPEPRAVQNAIDFLTIIGAFDEQENLTNLGNFLSVLPVDPKLGKMLIMGAIFRCFDPVLTIVASLSVRDPFLLALDNRDLAWMAKCRFSAKDYSDHMVFVRAYEGWKDAKRKGSAHEYCSINFLSSQTLQSIHLIRKQFSFILKEVGLVDTDANINNELSHNQSLVRAVICSGLFPGVASVVRTKIKTMDDDHVLLHASSVNERNQTIPYPWLVLNEKLKIKDVNIQDSTGVSDSILILFGGALSNGIQAGHLKMLDGYIDLFMDPNLADCYLKLKGELDKLIQKKLEDPGIDIHKEGKYLMLAVQELVLGDQCEGRFVFGRDCRKPNDE* 988
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g1992 987 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 323 783 IPR027417 -
Mal5g1992 987 Pfam Helicase conserved C-terminal domain 520 608 IPR001650 -
Mal5g1992 987 Pfam Oligonucleotide/oligosaccharide-binding (OB)-fold 823 900 IPR011709 -
Mal5g1992 987 PANTHER ATP-DEPENDENT RNA HELICASE 56 143 - -
Mal5g1992 987 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 326 493 IPR014001 -
Mal5g1992 987 CDD SF2_C_RHA 501 617 - -
Mal5g1992 987 Gene3D - 646 754 - -
Mal5g1992 987 PANTHER DEXH-BOX ATP-DEPENDENT RNA HELICASE DEXH5, MITOCHONDRIAL 56 143 - -
Mal5g1992 987 PANTHER ATP-DEPENDENT RNA HELICASE 501 984 - -
Mal5g1992 987 Gene3D - 268 492 IPR027417 -
Mal5g1992 987 Gene3D - 493 628 IPR027417 -
Mal5g1992 987 SMART helicmild6 503 609 IPR001650 -
Mal5g1992 987 PANTHER DEXH-BOX ATP-DEPENDENT RNA HELICASE DEXH5, MITOCHONDRIAL 147 498 - -
Mal5g1992 987 SMART ha2_5 666 757 IPR007502 GO:0004386
Mal5g1992 987 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 447 649 IPR001650 -
Mal5g1992 987 PANTHER ATP-DEPENDENT RNA HELICASE 147 498 - -
Mal5g1992 987 SMART ultradead3 314 513 IPR014001 -
Mal5g1992 987 Pfam Helicase associated domain (HA2) 667 737 IPR007502 GO:0004386
Mal5g1992 987 PANTHER DEXH-BOX ATP-DEPENDENT RNA HELICASE DEXH5, MITOCHONDRIAL 501 984 - -
Mal5g1992 987 CDD DEXHc_RHA-like 332 492 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g1992 Mal-Chr5 43803104 43821340 Proximal