Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g1985 ATGGCAAAACCATTTCCACATTCACAACACCTACTTCTTTTCATCTTCTTCCTTTCCACCATCCATCTTTCACAACAGTTACAATTTTCACAATCTCAAACACTTCTCAAACTTCAAGAAATTCTTGGTTACCCTACAACACTAAGAAACTTAAGCAGCACCAATGATTTCTGCAACATTGAACCTACTCCTTATTTAACACTAGTGTGCTATGAAGAAAATTTAACACAGTTGCATGTTGTTGGAAATAACAATGAGTTCACTTCATTGCCTCAAAATTTCAACTCATACACACTCTTTTCAACACTTTCCACTTTATCAAGCTTGAAAGTTCTCTCTTTGGTTTCTCTTGGTTTATGGGGGCCACTACCTGAAACTATAGCTCAATTATCTTCACTAGAAATACTTAACATTAGCTCAAATTACTTTAGTGGAGAAATACCATCTCAACTTTCACATCTTAATAATCTTCAATCATTAGTACTTGATGATAACCATTTCAATGGTCAAATTCCAAATATTTTAAGCTCACTTCATGGTTTGGTTGTGCTTAGTATGAAGAAAAATTTCATTAGTGGTAGCTTGCCAAATTCAATGAATGATCTTGTTACTCTTAGAGTTTTAGATCTATCAAATAATTTACTATTTGGTGAATTACCTCATCTTCATAATTTGGTTAACCTTCAAGTTCTTCACTTGGAAAATAACACATTAGGACCTCATTTTCCTTCTCTTCCTACAAAGTTAGTTTCACTTGTGCTTAGAAACAATAGTTTTAGGCTTGGTATACCTTCTAATATAAGTTCACTTTATCAACTTCAAAAATTGGACCTTTCTTTGAATGGTTTTGTAGGGCCATTTCCACCATCTTTATTGTCATTACCTTCAATCAATTACCTTGATGTTTCTTCAAATAAGTTTACTGGTATGCTTTTCAAGAATTTTTCGTGCAACGGAGATCTTCAATTTGTGAATTTATCTTCTAATCTTTTGAAAGGTGAACTACCTAGTTGTTTGAGACCAAAAACAAAGGTTGTTTTGTATGCTAGAAACTGTTTATCAAATGAGAAACAAGATCAGCATAGTTACAGTTTCTGCAGCAGTGAAGCTTTGGCGGTGAATATCATGCCTAATCAACAAGAGAAGCATAAGGGAACAACTAGTAAAGCAGTAGTTGTATTATCAAGCATAGGAGTTGTTGGATTATTGATTGTTGGAGTTGTTATCTTGGTTGTAAATCAGGTTCATCGAAAAAATGATACGAAAACAACTTCAATGTCTGCATTGGAACATGTTATTATTAGTCAGATACAGAATGAAGATAAAGAGAAAACTACTGCAAGGTCTATAGTAGAGCATATCATGAGAAGGGTTCCTGATAAAAATGCTATGAGAACACTTACAAGATCCATAAAGGAACATATCATGAGCCGAGTCAATAACAGACGCCTTGTGAGGGCGCCTTCGAGGTCCATAATAGAACATGTATCGTCAGTAAACACTGCAAAACTACTCACTGATGCAAGGTGTATATCTGAAACAATGAAGATGGGAACTGGCCTTCCTGCTTATAGGACCTTTCCTTTGGACCAACTTAAGGAAGCTACAAATAATTTTGATGCATCAAGTCTCATAAGTGAAGGTCCACTTGGTCAGATATATAAAGGGGTGCTCTCTGATGGGATGCAAATTACTATTAGAGGAATGAAGATACGAAAGAGGCACAGCCCTCAGGCCTATATGCACCATGTTGAGTTGATTTCAAAACTCCGACATTCACACTTGGTTAGTTCAGTTGGACATTCTTTTGAATGCAACCAGGAAGATTCAAGTGTCAACACTATTTTTCTCATATTTGAGTTTGTTCAAGACAAAAGTTTAAGAAGCCGCGTCTCCGGATCAAATGGAGAAAAGCTTTGTTGGACACAGAGAATAGCAGCCACAATTGGAGTAGTGAAAGGCGTTCAATTTTTGCACACAGGGATAGTGCCTGGACTATATTCAAATAATCTCAAGATAACTGATATTCTTTTGGATAACAATCATAATGTTAAAATAAGCAGTTATAATCTGCCACTCTATGCTGAAAACAAAAGAATGGTCAGCAATGGAACTTCTCCTGGAGTAAAAGGAAATCTTCAATCAAGGATAAACGATGGAGACAAGAATGATGTCTATGATATTGGGGTAATCTTGCTAGAAATCATTCTGGGAAGACCAATAATGTTCCACAATGAAGTTGGAACATTGAAAGATCTTTTACATGTAAGCATAAAAACGGATGATATAGCTAGAAGGAGTATTATTGATCCATTTGTTCATAAGGAATGTTCAGATGAATCATTAATGAAAATGATGGAGATATGTGTAAGATGTCTCTCTAGTGAACCAAATGAAAGACCTTCTGTGGAAGATATTCTTTGGAATTTGCAGTTTGCAGCACAAGTTCAGAATTCATGGAAAAGAGAAACAAGTGATCATAGAGACTCACCTATATCATCCACAAGAGAGACATAA 2517 0.354 MAKPFPHSQHLLLFIFFLSTIHLSQQLQFSQSQTLLKLQEILGYPTTLRNLSSTNDFCNIEPTPYLTLVCYEENLTQLHVVGNNNEFTSLPQNFNSYTLFSTLSTLSSLKVLSLVSLGLWGPLPETIAQLSSLEILNISSNYFSGEIPSQLSHLNNLQSLVLDDNHFNGQIPNILSSLHGLVVLSMKKNFISGSLPNSMNDLVTLRVLDLSNNLLFGELPHLHNLVNLQVLHLENNTLGPHFPSLPTKLVSLVLRNNSFRLGIPSNISSLYQLQKLDLSLNGFVGPFPPSLLSLPSINYLDVSSNKFTGMLFKNFSCNGDLQFVNLSSNLLKGELPSCLRPKTKVVLYARNCLSNEKQDQHSYSFCSSEALAVNIMPNQQEKHKGTTSKAVVVLSSIGVVGLLIVGVVILVVNQVHRKNDTKTTSMSALEHVIISQIQNEDKEKTTARSIVEHIMRRVPDKNAMRTLTRSIKEHIMSRVNNRRLVRAPSRSIIEHVSSVNTAKLLTDARCISETMKMGTGLPAYRTFPLDQLKEATNNFDASSLISEGPLGQIYKGVLSDGMQITIRGMKIRKRHSPQAYMHHVELISKLRHSHLVSSVGHSFECNQEDSSVNTIFLIFEFVQDKSLRSRVSGSNGEKLCWTQRIAATIGVVKGVQFLHTGIVPGLYSNNLKITDILLDNNHNVKISSYNLPLYAENKRMVSNGTSPGVKGNLQSRINDGDKNDVYDIGVILLEIILGRPIMFHNEVGTLKDLLHVSIKTDDIARRSIIDPFVHKECSDESLMKMMEICVRCLSSEPNERPSVEDILWNLQFAAQVQNSWKRETSDHRDSPISSTRET* 839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g1985 838 ProSiteProfiles Leucine-rich repeat profile. 204 226 IPR001611 GO:0005515
Mal5g1985 838 PANTHER INACTIVE LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE-RELATED 477 826 - -
Mal5g1985 838 Gene3D Phosphorylase Kinase; domain 1 501 621 - -
Mal5g1985 838 Gene3D Ribonuclease Inhibitor 30 151 IPR032675 -
Mal5g1985 838 ProSiteProfiles Protein kinase domain profile. 539 812 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g1985 838 PANTHER INACTIVE LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE-RELATED 13 415 - -
Mal5g1985 838 SUPERFAMILY Protein kinase-like (PK-like) 518 812 IPR011009 -
Mal5g1985 838 Pfam Protein kinase domain 543 807 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g1985 838 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 13 415 - -
Mal5g1985 838 Gene3D Ribonuclease Inhibitor 152 243 IPR032675 -
Mal5g1985 838 SUPERFAMILY L domain-like 30 354 - -
Mal5g1985 838 Gene3D Ribonuclease Inhibitor 244 361 IPR032675 -
Mal5g1985 838 Gene3D Transferase(Phosphotransferase) domain 1 623 835 - -
Mal5g1985 838 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 477 826 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g1985 Mal-Chr5 43384561 43389652 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g1985 44 820 Miscellaneous Gene Families AT3G03770 49.617 0.0 697
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Mal5g1985 Pkinase 6.7e-15 CL0016