Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g1984 ATGTTCCAAGTTAAAGAAGAAGATCCTTCAATCAAGCTTTTTGGAAGTGCTATTCAAATTCACCACAACACAGATTCACACTCTCAGATTCATTCTCTTCCACAACCCATCATGAATGGACTTGAAGAATCAACTAATGCTGATGTTGGTGTTCCTTTGAATGAAGTTTCTAGCAAACAAGCTAATCCACAAGAAGATGCTGATACTATTCCAAACATGTACAAAACCAGTACTTTGAAACCGGTGACCAAAGCAGTTCATAGAACTAATGAAAACAAGAGTGCCAAAAGAGATATTGATAGTCAAGAGAAAGTTTTCAAGAAGCCCGACAAGGTTCTGCCGTGTCCTCGCTGCAATAGTTTGGAGACAAAGTTTTGCTATTTCAACAATTACAATGTTAATCAACCAAGACATTTCTGCAAAAATTGCCAGCGGTATTGGACAGCTGGGGGGGCAATTAGGAATGTTCCTATTGGAGCCGGTAAGCGTAAAAATAAGCCTTCGCCTTTGCAGAATTCTCAAGTTCCTGTTACCCTTGATGCAGTACCCGTCATACACATAGATTCCAAGGAGGAAGTTCCTCTTAGTGATTCACTAAAAACTGTGTTAAATCTCAAGGGCCATAGAAAAATTGAAACGGACTGTTCTACTGTCAAAGAGCATATTGAGAACCCTTCCAGCTCTTCTGTGCAAGCTGCCGAATCCAGCGAGATGGAGTATTCGGAAAGTGGAATAGAGCATGTTGGTTTGACTTTGGCACCACAATGCAATGGCTTAATTCCTTTACATTCACTTCATTATTACTCTGCTCCTCCATGGACTTATCCATGTTGGAATCCTATGGCATTGAAGCCTGATAACATAACTTCAAGTCCTGCAACCATGATGGCGGTAGAAGTACCAATGACACCTTCATATTGGGGTTGTATGCCAAATTGGGTTGGCCAAATGGAAGAATTATCGTTAGTTGGATCTGCGTTTAACGGCATTCCATCGCCTTCATCTTCGGCTAGCAGTGGTACTTGTTCCGGCAATAGGTCACCAACTTTAGGAAAACATTGTAGAGATGGAAGTACACAAGAAGAAGACACAATGAAGCCGAATATTTGGGTGCCTAAAACTATCAGAATCAATGATCCAGAAGAGGCTGCTAAGAGTTCTATATGGTCAACATTGAGAACAAAATCTGAACAGAACAAACCTATTATGAAAGGAAGTGTTTTTAAATCATTTGAACCAAAGTCAAATGCAAGGTCTCGTGATTTAGACGATAATCAAATTCTAAGAGCAAACCCTGCCGCTTTCTCTCGCTCCGGATCCTTTCAGGAAAGCGTGTAA 1338 0.4073 MFQVKEEDPSIKLFGSAIQIHHNTDSHSQIHSLPQPIMNGLEESTNADVGVPLNEVSSKQANPQEDADTIPNMYKTSTLKPVTKAVHRTNENKSAKRDIDSQEKVFKKPDKVLPCPRCNSLETKFCYFNNYNVNQPRHFCKNCQRYWTAGGAIRNVPIGAGKRKNKPSPLQNSQVPVTLDAVPVIHIDSKEEVPLSDSLKTVLNLKGHRKIETDCSTVKEHIENPSSSSVQAAESSEMEYSESGIEHVGLTLAPQCNGLIPLHSLHYYSAPPWTYPCWNPMALKPDNITSSPATMMAVEVPMTPSYWGCMPNWVGQMEELSLVGSAFNGIPSPSSSASSGTCSGNRSPTLGKHCRDGSTQEEDTMKPNIWVPKTIRINDPEEAAKSSIWSTLRTKSEQNKPIMKGSVFKSFEPKSNARSRDLDDNQILRANPAAFSRSGSFQESV* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g1984 445 MobiDBLite consensus disorder prediction 333 354 - -
Mal5g1984 445 ProSitePatterns Zinc finger Dof-type signature. 115 151 IPR003851 GO:0003677|GO:0006355
Mal5g1984 445 MobiDBLite consensus disorder prediction 333 362 - -
Mal5g1984 445 PANTHER DOF-TYPE ZINC FINGER DNA-BINDING FAMILY PROTEIN 11 445 - -
Mal5g1984 445 PANTHER CYCLIC DOF FACTOR 2 11 445 IPR045174 GO:0003700|GO:0006355
Mal5g1984 445 ProSiteProfiles Zinc finger Dof-type profile. 113 167 IPR003851 GO:0003677|GO:0006355
Mal5g1984 445 Pfam Dof domain, zinc finger 110 166 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g1984 Mal-Chr5 43379581 43382092 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g1984 76 444 C2C2-Dof Transcription Factor Family AT5G39660 36.883 8.47e-60 200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Mal5g1984 zf-Dof 1.2e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g1984 - - cam:101489693 603.208