Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g1921 ATGTCAACCTCATCAATATCCTTCATCATTCCCTTTCTTCTCTCATTCTTCCTCATTTTGCCCTTTCTCCTCCAAGCACATACCTCTTCACCTTCTTCTTCCACTTCTTCTTCACAAGCATGCAAATCAACACTATATCCAAAACTATGTCGATCCATTCTCTCCTCGATCCGTTCATCTCCTACCGATCCCTACCACTTAGGCAAATTCTCAATAAAACAAAGCCTAAAACAAGCCAAAAAACTATCCAAAGTATTCAAAGACTTTCTCAAAAAACATCACCATTCCACTTCCCTTAACCACGCCGAGATCGCGGCGCTAGACGATTGTAGTGAACTAAACCAACTCAATGTAGATTACCTAGAGTTAGTTCGAGATGAATTGAAATCAGCTGATTCATCTTCTTTCAACAACACCGATGTGTTGGTGGAAAAAGTTGAAACTTATCTTAGTGCTGTGGCTACTAACCATTATACTTGTTATGATGGGTTGGTTGTGACTAAAAGTAACATTGCTAATGCACTTGTTGTGCCTTTGAGTAATGTTACGAAACTATATAGTATTTCACTTGGTTTGGCCACGGAGGCTTTGACTAAAAGTATTAAGAAACGTAAGACTCGTAAAAATGGTCTTCCTACTAAGGCTTATAAGGTCAGACAACCTCTTAAAAAGCTCATTAAGCTTCTTCACACAAAACACAGTTGTAATAATTCATCCAACTGTAATAGACACGAAAGGATTCTTAAAGAAAGCGAAAATAGAGGAATTTTACTGAAAGAATATGTTATAGTGAGCCTTGATGGAACAGAAAATTTCACTTCAATTGGAGAAGCTATTGATGCTGCACCTAATAATTTAAAGGCAGAAGATGGCTATTTTCTTATCTATGTCAAAGAAGGATTATATGAGGAATATGTTACCATTACGAAACATAAGAAGAATATTTTGCTTATTGGTGATGGTATTAACAAGACTTGCATCACAGGAAATCACAGTGTGGTAGATGGTTGGACAACTTTTAATTCTTCAACCTTTGCTGTGTCTGGAGAGAGATTTATAGCAGTGGACATAACATTCAAAAACACAGCAGGCCCTCAAAAGCATCAAGCAGTAGCAGTAAGAAACAATGCAGATCTCTCCATATTCTACCGTTGCAGTTTTGAAGGATACCAAGACACACTCTATGTTCATTCACTAAGACAATTCTACAGAGAATGTAACATCTATGGCACAGTTGATTTCATTTTCGGCAACGCCGCCGCAGTACTTCAATCTTGCAACATTTTTGCAAGAAAACCAATGGCAAATCAAAAAAACGCTGTAACAGCACAAGGCAGAACAGATCCAAATCAGAACACAGGAATTTCAATACAAAATTGTAGGATTGAAGCTGCACATGATTTGGCTAATGATTTGAATTCAACTAAGAATTACTTAGGAAGACCATGGAAATTGTATTCAAGAACTGTTTATTTGCAATCATACATTGGTGATTTAATTCAACCTTCTGGATGGTTAGAGTGGAATGGTACAGTTGGATTAGATACACTTTTTTATGGTGAGTTTAAAAATTATGGACCTGGTGCTATAACTCATAGTAGGGTACAATGGCATGGTTATAATTTAATGACTCCTACTCAAGCTTGGAATTTCACTGTCTTTAATTTTACATTGGGGAATACTTGGCTTCCTGATACTGATGTACCTTACACTGAAGGATTACATTTCGATGATTGA 1737 0.3685 MSTSSISFIIPFLLSFFLILPFLLQAHTSSPSSSTSSSQACKSTLYPKLCRSILSSIRSSPTDPYHLGKFSIKQSLKQAKKLSKVFKDFLKKHHHSTSLNHAEIAALDDCSELNQLNVDYLELVRDELKSADSSSFNNTDVLVEKVETYLSAVATNHYTCYDGLVVTKSNIANALVVPLSNVTKLYSISLGLATEALTKSIKKRKTRKNGLPTKAYKVRQPLKKLIKLLHTKHSCNNSSNCNRHERILKESENRGILLKEYVIVSLDGTENFTSIGEAIDAAPNNLKAEDGYFLIYVKEGLYEEYVTITKHKKNILLIGDGINKTCITGNHSVVDGWTTFNSSTFAVSGERFIAVDITFKNTAGPQKHQAVAVRNNADLSIFYRCSFEGYQDTLYVHSLRQFYRECNIYGTVDFIFGNAAAVLQSCNIFARKPMANQKNAVTAQGRTDPNQNTGISIQNCRIEAAHDLANDLNSTKNYLGRPWKLYSRTVYLQSYIGDLIQPSGWLEWNGTVGLDTLFYGEFKNYGPGAITHSRVQWHGYNLMTPTQAWNFTVFNFTLGNTWLPDTDVPYTEGLHFDD* 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g1921 578 Pfam Pectinesterase 262 559 IPR000070 GO:0030599|GO:0042545
Mal5g1921 578 Gene3D Invertase/pectin methylesterase inhibitor family protein 38 195 IPR035513 -
Mal5g1921 578 PANTHER PECTINESTERASE 11 574 - -
Mal5g1921 578 TIGRFAM PME_inhib: pectinesterase inhibitor domain 12 193 IPR006501 GO:0004857
Mal5g1921 578 ProSitePatterns Pectinesterase signature 2. 408 417 IPR033131 -
Mal5g1921 578 Pfam Plant invertase/pectin methylesterase inhibitor 39 191 IPR006501 GO:0004857
Mal5g1921 578 PANTHER PECTINESTERASE 11 574 - -
Mal5g1921 578 Gene3D - 257 574 IPR012334 -
Mal5g1921 578 SUPERFAMILY Pectin lyase-like 259 573 IPR011050 -
Mal5g1921 578 CDD PMEI-like_3 40 195 - -
Mal5g1921 578 SMART PMEI_2 32 192 IPR006501 GO:0004857
Mal5g1921 578 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 39 193 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g1921 Mal-Chr5 40987820 40992638 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g1921 40 574 Carbohydrate Esterase AT3G10720 60.185 0.0 677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g5357 2 128302110 128306457 Mal5g1921 5 40987820 40992638 PCT