Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g1918 ATGTCTTCTTTTAAGGCCTATGGTAAAGTTGATGAGTCCTCCCAAGCCATGTTTGAAGTTCGAAGGAAATCGCGAAAGCGAATAACTATCATAAGCTTGTCCACAATTGTCCTCATTGGTATTGTTTTTGCAGCGGTTTTTGGAACCGTTGCGCGTAACAATGCTCGTAATGACGACAAAAACAACTCAAACAACGATAACAATGATAATTCTCTTTCGAGTTCTGTTAAGGTTGTTTGTGATGTTACATTGTACAAAGATTCATGTCAAAGCAGTCTTAGTCCTCTTGTTCAACCTGGTCAGCAAATTCGACCCGAGGAGTTGTTCAAGTTGTCGATTCAAGTGGCATTAACTGCGGTCTCGAAAGGTGTTGAGTATTTTTCTCAGCATGGGACTTTTGATGACTTGAATTTGAATTTGGATAATAGAACAAAGGAAGCTTTGATCAATTGTAAGGATCTTTTAGGTCTTGCTGTTGATCATTTGAATAGCTCTTTGTCTTATGGGGGAAAGTCTTTGCTTGATGTTTTGGAGGACCTTGAAACTTGGTTGAGTGCTTCAGGTACTTACCAGCAAACATGCATTGATGGTTTAGAACAAGCAGAAGAAGCATTAAAGTCTAGTATTACAACAAATCTCAAAAACTCTACAGAATTCGCAAGCAACAGTCTTGCCATCATCACATGGCTTAACAAGGCTGCATCTACAGTGAACTTTAGACGCTTATTGAGTTTATCTCATCAGAATGAACAACCAAATTGGCTTCATCTTAAAGACAGAAAGCTACTTCAAACAGACAATGATTTGAGGAAGAAAGCCGACATTGTTGTCGCGAAAGATGGGAGTGGGAAATACGAAACAATTTCAGCAGCATTGGAACATGTCCCTAATAAAAGTGACAAGAGGACTGTGATCTATGTGAAGAAAGGAATTTATTATGAAAATGTTAGGGTGGAAAAGACTAAATGGAATGTCATGATTATTGGTGATGGTATGAATGTTACTATTGTTTCTGGAAGTCTTAATTTTGTGGATGGTACACCAACATTTTCAACAGCAACATTTGCTGTGTTTGGGAGAAATTTCATTGGCAGAGACATAGGCTTTAAGAACACAGCTGGTCCACAAAAACACCAAGCAGTAGCACTAATGACAAGTGCAGATCAAGCAGTTTTCTACAAATGTTCCATGGATGCATATCAAGACACACTCTATGCTCACTCAAATCGCCAATTCTACCGCGAATGCAACATCTACGGAACAGTTGATTTCATATTCGGCAACTCAGCCGTCGTATTACAAAACTGCAACATTTTACCAAGACAACCTATGCCAGGCCAACAAAACACAATAACAGCACAAGGCAAAAATGATCCTAACATGAACACAGGAATTTCAATTCAAAATTGCAATGTTTCGCCATTCGGAAACTTGAGTTCGGTTAAAACATATTTAGGAAGACCTTGGAAGAATTACTCAACAACAGTGTTTATGCAATCTAACTTAGGAAATTTTATTAGTCCAAATGGATGGTTACCATGGGTTGGAGATTCTGCACCAGATACTATATTTTATGCTGAGTTTCAGAATTTTGGAGGTGGTGCTTCAATGAAGAATAGGGTTAAGTGGAAGGGTTTGAAAAGTATTACAAGTAAACAAGCTAATAAGTTTACTGTTAAGGCTTTTCTTCATGGAGATAAATGGATTCCTGCTTCTGGTGCAACATTTAAATCTTCTCTGTAA 1743 0.3804 MSSFKAYGKVDESSQAMFEVRRKSRKRITIISLSTIVLIGIVFAAVFGTVARNNARNDDKNNSNNDNNDNSLSSSVKVVCDVTLYKDSCQSSLSPLVQPGQQIRPEELFKLSIQVALTAVSKGVEYFSQHGTFDDLNLNLDNRTKEALINCKDLLGLAVDHLNSSLSYGGKSLLDVLEDLETWLSASGTYQQTCIDGLEQAEEALKSSITTNLKNSTEFASNSLAIITWLNKAASTVNFRRLLSLSHQNEQPNWLHLKDRKLLQTDNDLRKKADIVVAKDGSGKYETISAALEHVPNKSDKRTVIYVKKGIYYENVRVEKTKWNVMIIGDGMNVTIVSGSLNFVDGTPTFSTATFAVFGRNFIGRDIGFKNTAGPQKHQAVALMTSADQAVFYKCSMDAYQDTLYAHSNRQFYRECNIYGTVDFIFGNSAVVLQNCNILPRQPMPGQQNTITAQGKNDPNMNTGISIQNCNVSPFGNLSSVKTYLGRPWKNYSTTVFMQSNLGNFISPNGWLPWVGDSAPDTIFYAEFQNFGGGASMKNRVKWKGLKSITSKQANKFTVKAFLHGDKWIPASGATFKSSL* 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g1918 580 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 74 230 IPR035513 -
Mal5g1918 580 PANTHER PECTINESTERASE 5 578 - -
Mal5g1918 580 ProSitePatterns Pectinesterase signature 2. 418 427 IPR033131 -
Mal5g1918 580 PANTHER PECTINESTERASE 5 578 - -
Mal5g1918 580 SMART PMEI_2 71 226 IPR006501 GO:0004857
Mal5g1918 580 SUPERFAMILY Pectin lyase-like 272 576 IPR011050 -
Mal5g1918 580 Gene3D Invertase/pectin methylesterase inhibitor family protein 73 232 IPR035513 -
Mal5g1918 580 Gene3D - 269 580 IPR012334 -
Mal5g1918 580 TIGRFAM PME_inhib: pectinesterase inhibitor domain 69 230 IPR006501 GO:0004857
Mal5g1918 580 Pfam Plant invertase/pectin methylesterase inhibitor 75 226 IPR006501 GO:0004857
Mal5g1918 580 CDD PMEI-like_3 79 232 - -
Mal5g1918 580 Pfam Pectinesterase 274 566 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g1918 Mal-Chr5 40968085 40971291 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g1918 7 580 Carbohydrate Esterase AT3G10710 55.806 0.0 654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g5356 2 128296914 128301103 Mal5g1918 5 40968085 40971291 PCT