Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g1911 ATGGAAGAAGACAACAACAACAACAATGTTCATCATGCTTCAGATTCATTTGACAAATCTAAGATTGTTGAAGTCAAACCCTTACGTAGTTTAGCTCCTGTTTTGCCTAAACATGTTCAATCTGCGTTTTCTGGTCAATACCCATCTGGGTTTCCTCCATTTTATGCATTCGTGAAACCCCTTGAAATTCCTGTTCCAAAACAAGCTGAAGAAACCCATGTTGATGTTAAAGTAGCCGAGGAAACACCGGCAAAACCAGCAGCAGCAGCAGCTCAAGATACTCCTGTTGCTGCTAAGGTGACTCCAATAAGGTCATACAAGAGGGAAGTTGATGATGAATTGAATCCACAAGGCGATGGAGATAACGATGATTCGTTTTCAGAAGGGTTTAATGGTGATGAGTTTGTAGGTGATAGAGGAAAGCGTGGTACGCAGAATATACAGAACTGTAGAGAGTTTCTTAAAAGGAAGAAGAACAAAACTCAGGAGGCGTTCGTTGGTGGTACGAGTTCTTATGTTGCTGTTAACCCGACACCAAAAGATGATGGTGATAGGGATTCGGTTAATCATGTGCTCATGACTTTTGATTCAATTCGAAGAAGGCTATGCCAACTTGAAGAATCGAAGGAACTAAACAATGCACATGCCATCAAGCGTGCGGATCTAAGAGCGAGTAATACTTTGACGTGTAGAGGGGTGAAAACAAACTTGAGGAGAAGAGTGGGAGTGGTGCCTGGGATTGAGATTGGGGATATATTCTTTTTTCGAATGGAAATGGTTCTTGTTGGTTTACATGCGCAATCAATGGGTGGAATTGATTATATGAATATCAAGGATGAGTCTAAGATGGATACTGTGGCGTTAAGCGTTGTTTCGTCGGGAGTATATGGTGATGATACAGAGGATAATGATATTTTAATTTATAGTGGTCAGGGTGAGAATTTCAACAAGAAAGAGAAACATGTGACTGATCAGAAGCTTCAAAGGGGTAATCTTGCTTTGGACAGAAGTGCGCAGCGGCATGATGAAGTTAGAGTCATCCGGGGCTTGAGAGATCCTGTGAATAGAAGTGCAAAAATCTATATGTATGATGGTTTATATAGAATCCAAGATTCTTGGATTGAAAGAGGGAAATCTGGCGGTGGTATATTTAAGTATAAGTTGGTAAGGTCGCCTGGTCAAAAAGCTGCTTTTGCTGCATGGAAATTGGCTCAAAAGTGGAAGGCAGGTTCCTGTTTAAGGAATGGTTTTATTCTTGCTGACCTCTCCAATGGAGTTGAAAGTATTCCAGTATCACTTGTCAATGATGTCGATGATGAGAGGGGTCCGGCTTTTTTCACTTATTTCATGTCTCTCAAAAAACTGAAACCTTTTGGTCTAGTGCAGCCTTCTTTAGGCTGCAATTGTAACACAGCATGTGTCCCAGGTGATTTGAACTGTTCATGCATTCAAAGAAATGAAGGTGATTTTCCGTATACTGCAAATAGTATTCTAGTGAGTCGGAAGCCGCTTATTCATGAATGTGGCCCTATGTGTCGGTGTTTTCCTAACTGCAAAAATCGACTTTCGCAGACTGGTTTAAAACAACACATGGAAGTGTTCAAAACAAAGGGTAGAGGTTGGGGGCTTCGAACACTGGATCCTATACGTGCTGGTACCTTTATTTGTGAGTATGCAGGAGAAGTTATTGACAGAGCCGAGGTATGTCAGGATGGTGAAGGAGATTATGACGAATATGTTTTTGATACAAGCCGTATTTATGAACCATTCAAGTGGAATTTTGAACGTAGCTTACTGGAAGATGTAAGTTCAAATGTTTCTAGTGAGGATTATACTATACCATCTCCTCTAATTATAAGCGCTAAGAATGTGGGAAATGTGGCTAGATTCATGAATCATAGTTGCTCCCCAAATGTTTTTTGGCAGCCAGTCTTATACGCGGAAAACAATCAATCATTTCTCCACATTGCATTTTTTGCCCTTAGACATATTCCTCCAATGGGAGAGTTAACATATGATTATGGAGTTGTCCCTGCTGGTCCTGGAGGTAGTAGTACACTCAGACGGAGAAAAAAATGCTTGTGTGGATCAGAAAAGTGCCGTGGTTTCTTTGGTTGA 2118 0.4093 MEEDNNNNNVHHASDSFDKSKIVEVKPLRSLAPVLPKHVQSAFSGQYPSGFPPFYAFVKPLEIPVPKQAEETHVDVKVAEETPAKPAAAAAQDTPVAAKVTPIRSYKREVDDELNPQGDGDNDDSFSEGFNGDEFVGDRGKRGTQNIQNCREFLKRKKNKTQEAFVGGTSSYVAVNPTPKDDGDRDSVNHVLMTFDSIRRRLCQLEESKELNNAHAIKRADLRASNTLTCRGVKTNLRRRVGVVPGIEIGDIFFFRMEMVLVGLHAQSMGGIDYMNIKDESKMDTVALSVVSSGVYGDDTEDNDILIYSGQGENFNKKEKHVTDQKLQRGNLALDRSAQRHDEVRVIRGLRDPVNRSAKIYMYDGLYRIQDSWIERGKSGGGIFKYKLVRSPGQKAAFAAWKLAQKWKAGSCLRNGFILADLSNGVESIPVSLVNDVDDERGPAFFTYFMSLKKLKPFGLVQPSLGCNCNTACVPGDLNCSCIQRNEGDFPYTANSILVSRKPLIHECGPMCRCFPNCKNRLSQTGLKQHMEVFKTKGRGWGLRTLDPIRAGTFICEYAGEVIDRAEVCQDGEGDYDEYVFDTSRIYEPFKWNFERSLLEDVSSNVSSEDYTIPSPLIISAKNVGNVARFMNHSCSPNVFWQPVLYAENNQSFLHIAFFALRHIPPMGELTYDYGVVPAGPGGSSTLRRRKKCLCGSEKCRGFFG* 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g1911 705 SUPERFAMILY PUA domain-like 226 411 IPR015947 -
Mal5g1911 705 SUPERFAMILY SET domain 428 702 IPR046341 -
Mal5g1911 705 SMART set_7 529 681 IPR001214 GO:0005515
Mal5g1911 705 MobiDBLite consensus disorder prediction 109 143 - -
Mal5g1911 705 ProSiteProfiles YDG domain profile. 242 390 IPR003105 -
Mal5g1911 705 Pfam SET domain 540 675 IPR001214 GO:0005515
Mal5g1911 705 Gene3D - 225 410 IPR036987 -
Mal5g1911 705 Gene3D SET domain 411 704 IPR046341 -
Mal5g1911 705 ProSiteProfiles Post-SET domain profile. 689 705 IPR003616 -
Mal5g1911 705 Pfam SAD/SRA domain 241 394 IPR003105 -
Mal5g1911 705 ProSiteProfiles SET domain profile. 529 675 IPR001214 GO:0005515
Mal5g1911 705 SMART preset_2 419 513 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Mal5g1911 705 ProSiteProfiles Pre-SET domain profile. 465 526 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Mal5g1911 705 SMART G9a_1 237 394 IPR003105 -
Mal5g1911 705 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-9 SPECIFIC SUVH1 15 703 - -
Mal5g1911 705 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 15 703 - -
Mal5g1911 705 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 23 705 IPR025794 GO:0016571
Mal5g1911 705 Pfam Pre-SET motif 423 521 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g1911 Mal-Chr5 40781131 40783248 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g1911 15 705 Su(var)3-9 homologs AT1G73100 48.196 0.0 640
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Mal5g1911 SAD_SRA 1e-44 CL0178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g5324 2 126928786 126930771 Mal5g1911 5 40781131 40783248 PCT