Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g1882 ATGAAGACATCACAAATGAACATGACATGTACTACAAGGTTTCTAAGCTTCATTCTACTTCATCTTTTCCTTTTCACCTTAACAAATGCACAATCACCATATTACATGATAAATTTTTGCCAGAATTCAACAGAAATAACAAACACCACATCATACCGATCCAACGTTAACAATCTTCTTTCATGGATAAAAACCGATTCTGCAACAGGTTCAGTAACTAACCACACCGCCATACGCGGCAATAACAAAAACAACAATGATGGTGATGTTGTTTACGGGTTCTACGATTGTCGTGGTGACATAACAGGAAGTTTCTGTGAATTTTGTATCAACGCTGCTGTTAGAGATATCGAGCTACGTTGTCCCAACGGTGTCTCGGCTCTGATATGGTATGACATATGCGTCATCGGTTATTCTAACCACAATTCCTCAGGAAAAGTTTCTGTAACCCCATCATGGAATTTAACCGGATCCAAAAACGTTAAGGACTCAACTGAACTTGAGAAAGCAGTAACCGACATGAGGAGTTTGATAGGAAAAGTGACTGCAGAAGCCAATTCCAATTGGGCAGTGGGAGAGTTTGATTTGAGTGACACTGAGAAAAGGTATGGTTGGGTGCAGTGTAATAGTGAACTTACTAAAGATGGTTGCAGATATTGTTTGGAGACTATGTTGGATAAAGTTCCTCAGTGCTGTGGAACAAAGGTAAAATGGGCAGTGGTGTCTCTTAGTTGTGGATTGGAGATTGATGATAATAAGTTCTACGACGTGCAAACAGGATCTCCTCCAGTGCCAAACACAGGCAAGCAGGAAGGAACAAGTAAAACTAAAACCTTGATCATCACCTTAGTAAGTGTCCTGGTGGCAGTAGCTCTATTAAGTTGTTGTGTCTACTACTACCGGAGAAAGAATTCGTTAAGTAAAGGTGATTTGCTGTTGAGGACCATTACTCCTATATCTTTCCGTGATCAGGTTCAAAGAGAGGATTCATTAAATGGAGACCTTCCTACAATCCCTTTATATGTAATTCGACAAAGCACCGATAACTTTTCAGAGTCATTTAAATTAGGAGAAGGTGGATTTGGTCCAGTTTACAAGGGTACTTTACCAGATGGGACCGAAATTGCAGCTAAAAGGCTTTCCGAAACATCAGGTCAAGGTTTAGAGGAGTTTAAGAATGAAGTAATTTACATAGCTAAACTACAACATAGAAACCTTGTGAGACTCTTAGGTTGCTGCTTTGAAGAAAATGAAAAGATACTGGTATATGAGTACATGCCAAATTCAAGCCTTAACTTTCACCTTTTCGATAAAGAAAAACATAAGCATCTGAATTGGAAATTAAGACTAAGCATTATCAAAGGAATCGCAAGAGGACTGCTATACCTTCATGAAGATTCTCCACTTAGAGTAATCCACAGAGACCTAAAAGCCAGCAATGTTCTTCTGGATGATGAAATGAATCCAAAAATATCAGATTTTGGATTAGCAAGGACATTTGAGAAAGATCAATGTCAGACGAAAACAAAAAGAGTTATTGGCACCTATGGATACATGGCTCCAGAATATGCTATGGCTGGATTATTTTCAGTGAAATCCGATGTTTTCAGTTTTGGAGTTCTTATATTAGAAATAATTTATGGAAAAAGAAATGGAGAATTCTTTCGTTCAGAACATATGCAGAGTCTTATACTATATACTTGGAAACTCTGGTGTGAAGGAAAAAGTTTAGAATTAATTGATCCGTTCCACCAAAAAACATACATTGAAAGTGAAGTCATGAAGTGTATACACATTGGTTTATTGTGTGTACAAGAAGATGCAGCAGATCGACCAACCATGTCCACCGTTGTTCGCAGGCTAGGGAGTGACACAATGGACCTTCCAAAACCCACGCAACCAGCTTTTTCAGTTGGGAGAATGTCCAAGAATGAAGGTCCAACTTCAAAAAACTCCAAGGATAATTATTCTGTTGATGAAGTAACCCTTACTATTGTTTCACCTAGATAA 2010 0.3841 MKTSQMNMTCTTRFLSFILLHLFLFTLTNAQSPYYMINFCQNSTEITNTTSYRSNVNNLLSWIKTDSATGSVTNHTAIRGNNKNNNDGDVVYGFYDCRGDITGSFCEFCINAAVRDIELRCPNGVSALIWYDICVIGYSNHNSSGKVSVTPSWNLTGSKNVKDSTELEKAVTDMRSLIGKVTAEANSNWAVGEFDLSDTEKRYGWVQCNSELTKDGCRYCLETMLDKVPQCCGTKVKWAVVSLSCGLEIDDNKFYDVQTGSPPVPNTGKQEGTSKTKTLIITLVSVLVAVALLSCCVYYYRRKNSLSKGDLLLRTITPISFRDQVQREDSLNGDLPTIPLYVIRQSTDNFSESFKLGEGGFGPVYKGTLPDGTEIAAKRLSETSGQGLEEFKNEVIYIAKLQHRNLVRLLGCCFEENEKILVYEYMPNSSLNFHLFDKEKHKHLNWKLRLSIIKGIARGLLYLHEDSPLRVIHRDLKASNVLLDDEMNPKISDFGLARTFEKDQCQTKTKRVIGTYGYMAPEYAMAGLFSVKSDVFSFGVLILEIIYGKRNGEFFRSEHMQSLILYTWKLWCEGKSLELIDPFHQKTYIESEVMKCIHIGLLCVQEDAADRPTMSTVVRRLGSDTMDLPKPTQPAFSVGRMSKNEGPTSKNSKDNYSVDEVTLTIVSPR* 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g1882 669 MobiDBLite consensus disorder prediction 637 659 - -
Mal5g1882 669 SMART serkin_6 350 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g1882 669 Pfam Salt stress response/antifungal 173 249 IPR002902 -
Mal5g1882 669 Pfam Salt stress response/antifungal 40 140 IPR002902 -
Mal5g1882 669 Gene3D Transferase(Phosphotransferase) domain 1 426 630 - -
Mal5g1882 669 ProSiteProfiles Gnk2-homologous domain profile. 34 143 IPR002902 -
Mal5g1882 669 ProSiteProfiles Gnk2-homologous domain profile. 149 254 IPR002902 -
Mal5g1882 669 SUPERFAMILY Protein kinase-like (PK-like) 334 638 IPR011009 -
Mal5g1882 669 Gene3D Phosphorylase Kinase; domain 1 317 425 - -
Mal5g1882 669 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 25 667 - -
Mal5g1882 669 Gene3D - 151 254 IPR038408 -
Mal5g1882 669 Gene3D - 33 142 IPR038408 -
Mal5g1882 669 PANTHER PROTEIN KINASE DOMAIN 25 667 - -
Mal5g1882 669 MobiDBLite consensus disorder prediction 630 659 - -
Mal5g1882 669 Pfam Domain of unknown function (DUF3403) 623 669 IPR021820 GO:0004674
Mal5g1882 669 Pfam Protein tyrosine and serine/threonine kinase 355 621 IPR001245 GO:0004672|GO:0006468
Mal5g1882 669 CDD STKc_IRAK 356 621 - -
Mal5g1882 669 ProSitePatterns Serine/Threonine protein kinases active-site signature. 471 483 IPR008271 GO:0004672|GO:0006468
Mal5g1882 669 ProSiteProfiles Protein kinase domain profile. 350 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g1882 Mal-Chr5 39751480 39773056 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g1882 9 669 Receptor kinase-like Gene Family AT4G05200 39.478 7.72e-171 503
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mal5g1882 PK_Tyr_Ser-Thr 7.6e-49 CL0016