Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g1864 ATGCTAAATAATGAATGCATCATTTTAATCCATGTCACTTTAGCAGCCAAGCATGAAGATGCAAGTAACAAAAAGACCTTGATCATCACCTTAGTAAGTGTACTGGTGGCAGTAGCTCTTCTATGTTGTTGTATCTACTACTCCTGCAGAAGAAAGGATGGGTTATCTGAAGGTGAATTGCTGTTAAGGAACACTACTCCTATACCTTTTTTTGATAACGTTCGAAGAGAGGATACATTGAATGGAGACCTTCCTACAATCCCTTTTACTGTAATTCAACAATCCACTAATTACTTTTCAATATCATCAAAGTTAGGAGAAGGTGGATTTGGCCCTGTTTACAAGGGTACTTTAGCAGATGGAACAGAAATTGCGGTAAAAAGACTTGCAGTAACGTCTGATCAAGGTGCAGAAGAATTCAAGAATGAAGTAATATTTATAGCTAAACTGCAACATAGAAACCTCGTGAAACTCTTAGGTTGCTGCATTGAGGAAAGCGAAAAGATACTCGTATATGAGTATATGCCAAATTCAAGCCTTGACTTTCACCTCTTCAATGAAGCACAACATAAGCAACTAGATTGGACATTACGACTAAGTATTATCAATGGAATCGCAAGAGGACTGCTATACCTTCACCAGGATTCTCGACTTAGAGTTATCCATAGAGACCTGAAAGCCAGCAATGTTCTTCTGGATGTTGAAATGAATCCAAAAATATCAGATTTCGGATTGGCAAGAAAATTTGAAAAAGGCCAAAGTCAGACAGAAACAAAAAGAGTTATGGGAACCTACGGATACATGGCTCCAGAATATGCTATGGCTGGATTATTTTCAGTGAAATCCGATGTTTTCAGCTTTGGAGTTCTTTTATTAGAAATTGTTTATGGAAAAAGGAATGGTGAATTCTTTCTTTCAGATCATAGGGAAAGTCTTCTATTTTGTACGTGGAAACTTTGGTGCGAAGGAAAAAGTTGGGAATTAATTGATCCAATCCACAAAGAATCATACAATGAAAGTGAGGTTATGAGGTGCATACACATTGGTTTATTGTGCGTACAAGAAGATGCAGCGGATCGACCAACCATGTCCATCGTCGTTCTCATGCTAGGGAGTGACACAATGCCTCTTCCAAAACCCACGAAACCAGCATTTTCAGTTGGAAGAATGCCAAACCCAGAAGATTCAAATTCAAAAAGTTCTAAGGATAATTATGTTGATGAAGTACCCATAAGTATTGTTTCACCTAGATAG 1254 0.3788 MLNNECIILIHVTLAAKHEDASNKKTLIITLVSVLVAVALLCCCIYYSCRRKDGLSEGELLLRNTTPIPFFDNVRREDTLNGDLPTIPFTVIQQSTNYFSISSKLGEGGFGPVYKGTLADGTEIAVKRLAVTSDQGAEEFKNEVIFIAKLQHRNLVKLLGCCIEESEKILVYEYMPNSSLDFHLFNEAQHKQLDWTLRLSIINGIARGLLYLHQDSRLRVIHRDLKASNVLLDVEMNPKISDFGLARKFEKGQSQTETKRVMGTYGYMAPEYAMAGLFSVKSDVFSFGVLLLEIVYGKRNGEFFLSDHRESLLFCTWKLWCEGKSWELIDPIHKESYNESEVMRCIHIGLLCVQEDAADRPTMSIVVLMLGSDTMPLPKPTKPAFSVGRMPNPEDSNSKSSKDNYVDEVPISIVSPR* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g1864 417 MobiDBLite consensus disorder prediction 391 405 - -
Mal5g1864 417 SMART serkin_6 99 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g1864 417 ProSiteProfiles Protein kinase domain profile. 99 375 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g1864 417 PANTHER PROTEIN KINASE DOMAIN 11 415 - -
Mal5g1864 417 MobiDBLite consensus disorder prediction 379 417 - -
Mal5g1864 417 Gene3D Phosphorylase Kinase; domain 1 71 174 - -
Mal5g1864 417 ProSitePatterns Serine/Threonine protein kinases active-site signature. 220 232 IPR008271 GO:0004672|GO:0006468
Mal5g1864 417 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 11 415 - -
Mal5g1864 417 Pfam Protein tyrosine and serine/threonine kinase 101 367 IPR001245 GO:0004672|GO:0006468
Mal5g1864 417 SUPERFAMILY Protein kinase-like (PK-like) 84 395 IPR011009 -
Mal5g1864 417 CDD STKc_IRAK 105 370 - -
Mal5g1864 417 Gene3D Transferase(Phosphotransferase) domain 1 175 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g1864 Mal-Chr5 38681539 38683501 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g1864 23 387 Receptor kinase-like Gene Family AT4G23230 52.603 1.36e-133 395
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mal5g1864 PK_Tyr_Ser-Thr 4.9e-49 CL0016