Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g1863 ATGGAAGGAATACAACTAAATTTGACATCAATCTTTTTTGCTTTCCTACTAAATTTAAGCTTCAAACAACTCATTACAGAAGCTCAATTATCACCCACTTATGTGGGAGATAACTGTAAATACTCACCACCAAGGCCTCTTAGCAATGCATACAAAAAAAATCTCAATAGCATCCTCTCATATCTATCTGCTGATGCAGCCACAAGCAAAGGTTATAACTACACCAGCATAGGTGACAACACAACAAAAGGAGATGCAGTGTATGGTATCTATGATTGCCGTGGCGATGTATACTTTTGTCAATTCTGTGTCTCTGCTGCTACCAGAGAAGTTCTTGAGCGCTGCCCCGATAGAGTCTCCGCGACTATATATTATAGCTTCTGCATGTTAAGTTACTCAAATGAGAACTTCTTTGGGAAAGTCATAACATACCCTTCTTACACACATTTTGGAGCCAAAAACGTCTCTAGTGCAATAGAGATTCAGAAAAGTAAGGATTTGATGAAACTTTTGATCAGAAAAGCAACTAATGAGACTAATCAACTATACTATATGGGTGGTTTCAACTTGAGTTCTACTGAGAGTAGGTATGGACTAGTTCAATGCCGTAGAGATCTTTCAAATGAAAGGTGCAGACAGTGTTTGGAGTTTATGTTAGCAAAGGTTCCAAAATGTTGTGAACATAAGTTGGGGTGGCAAGTTTCATCTGCTAGTTGTATGATTAGGTATGATGATTATATGTTCTATCTTTTCCACGAACAATCACCGTCGGTACTTGTTCCTGATCCACAAACAGTTACTGCAAAAAAGAACAGTACTAGTAAGTCAAGAAACTTGATCATTGGCTTTAGTGTGCTGGGATCAGTAGTTCTGCTATGCTCCACTATGTGCTTCTGGTACAAGAATAGAGTTAGAAAAGATTGGCTGGAACCTGCATATGAGGAAACACTGAATGCAGATCTGCCTACAATACCATTGATCACAATTCAACATTGTACTGATAACTTTTCAGAAACATCTAAATTAGGGGAAGGTGGATTTGGATCTGTGTATAAGGGAACTCTTCCTGATGGAAGACAAATAGCAGTAAAAAGGCTCTCAAGAACTTCTGGTCAAGGCTCAGAGGAGTTCAAGAATGAAGTAATGTTTATAGCGAAATTGCAACATCGCAACCTTGTAAGACTTTGGGCATGCTGCTTGGAAGGAAATGAAAAGCTACTTGTGTATGAGTTTATGCCGAATGCAAGTCTCGACTTTCACCTGTTTGATTGTGAAAAAAGAAAGGAACTCAATTGGAAACTAAGTTTGAGCATTATCAATGGAATAGCAAAAGGTCTTTTATACCTCCATGAGGACTCTAGACTAAGGGTAATCCATAGAGATCTTAAAGCTAGCAATATTCTACTAGATCATGAAATGAATCCTAAAATATCAGATTTTGGATTGGCAAGGGCATTTGACATAGGCCAGAACCAGGCGAATACAAGACGAATAATGGGTACCTATGGATACATGGCTCCAGAATACGCGATGGAAGGAGTGTTTTCTGTGAAAACGGACGTATTCAGCTATGGAGTACTAGTTTTGGAAATCATTAGTGGGAAAAAGAATACCGGATTCTATCTGTCGGAACATGGTCAAAGTCTTCTTTTATATACATGGAAAAAGTGGTGCGACGGAAAATGTTTAGAAATTATGGATTCGATACTAGGTACATCGTGTATAGACAATGAAGTTGTGAGGTGCATAAACATTGGTTTATTGTGTGTTCAAGAAGACGCGGCGGATAGACCAACCATGTCAACTGTTGTTGTAATGCTGGGTAGTGACACAATGACTCTTCCAAAACCCAAACAACCTGCTTTTTCAATTGGAAGAATGAACTCCGGCGATCCATCTACCTCGAAAAGTGTCAAGGATCCTTCCATCAATGATGTAACAGTCTCTAATATTTTACCAAGGTAA 1965 0.3878 MEGIQLNLTSIFFAFLLNLSFKQLITEAQLSPTYVGDNCKYSPPRPLSNAYKKNLNSILSYLSADAATSKGYNYTSIGDNTTKGDAVYGIYDCRGDVYFCQFCVSAATREVLERCPDRVSATIYYSFCMLSYSNENFFGKVITYPSYTHFGAKNVSSAIEIQKSKDLMKLLIRKATNETNQLYYMGGFNLSSTESRYGLVQCRRDLSNERCRQCLEFMLAKVPKCCEHKLGWQVSSASCMIRYDDYMFYLFHEQSPSVLVPDPQTVTAKKNSTSKSRNLIIGFSVLGSVVLLCSTMCFWYKNRVRKDWLEPAYEETLNADLPTIPLITIQHCTDNFSETSKLGEGGFGSVYKGTLPDGRQIAVKRLSRTSGQGSEEFKNEVMFIAKLQHRNLVRLWACCLEGNEKLLVYEFMPNASLDFHLFDCEKRKELNWKLSLSIINGIAKGLLYLHEDSRLRVIHRDLKASNILLDHEMNPKISDFGLARAFDIGQNQANTRRIMGTYGYMAPEYAMEGVFSVKTDVFSYGVLVLEIISGKKNTGFYLSEHGQSLLLYTWKKWCDGKCLEIMDSILGTSCIDNEVVRCINIGLLCVQEDAADRPTMSTVVVMLGSDTMTLPKPKQPAFSIGRMNSGDPSTSKSVKDPSINDVTVSNILPR* 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g1863 654 ProSiteProfiles Gnk2-homologous domain profile. 143 248 IPR002902 -
Mal5g1863 654 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 23 652 - -
Mal5g1863 654 Pfam Salt stress response/antifungal 165 246 IPR002902 -
Mal5g1863 654 Pfam Salt stress response/antifungal 48 134 IPR002902 -
Mal5g1863 654 Pfam Protein tyrosine and serine/threonine kinase 339 606 IPR001245 GO:0004672|GO:0006468
Mal5g1863 654 ProSitePatterns Serine/Threonine protein kinases active-site signature. 457 469 IPR008271 GO:0004672|GO:0006468
Mal5g1863 654 Gene3D Phosphorylase Kinase; domain 1 299 411 - -
Mal5g1863 654 ProSiteProfiles Gnk2-homologous domain profile. 33 137 IPR002902 -
Mal5g1863 654 MobiDBLite consensus disorder prediction 616 654 - -
Mal5g1863 654 MobiDBLite consensus disorder prediction 626 654 - -
Mal5g1863 654 SUPERFAMILY Protein kinase-like (PK-like) 314 607 IPR011009 -
Mal5g1863 654 CDD STKc_IRAK 342 607 - -
Mal5g1863 654 SMART serkin_6 336 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g1863 654 PANTHER CYSTEINE-RICH RECEPTOR-LIKE KINASE 23 652 - -
Mal5g1863 654 Gene3D Transferase(Phosphotransferase) domain 1 412 616 - -
Mal5g1863 654 Gene3D - 35 137 IPR038408 -
Mal5g1863 654 Gene3D - 147 248 IPR038408 -
Mal5g1863 654 ProSiteProfiles Protein kinase domain profile. 336 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g1863 654 Pfam Domain of unknown function (DUF3403) 609 654 IPR021820 GO:0004674
Mal5g1863 654 ProSitePatterns Protein kinases ATP-binding region signature. 342 364 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g1863 Mal-Chr5 38654996 38658538 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g1863 10 654 Receptor kinase-like Gene Family AT4G05200 41.973 3.62e-172 506
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mal5g1863 PK_Tyr_Ser-Thr 5.8e-47 CL0016