Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g1852 ATGGCTTCTTCACCTCCTTCTTTCTCTCCTTCTCGTACCACCTGCGCTTCTCTCCTCCGTCAATTGCAGGTGATATGGGATGAGATTGGGGAGAGTGACACTGATAGAGACAATATGCTTCTTCAACTGGAGCAAGAGTGTCTTGACATTTATCACAGAAAGGTTGAGGACACCAGAAAGCACAAAGCTGACTTGAATAAGTGGTTGGATGAGGCTGAATCTGAAGTCGCTGACATCGCTTCTTCTCTTGGGGATGATTGTGTGTTGTTCTCACGGGGAAAGGGCACTCTGAAGCAGCAATTAGCCAACATCAGACCTGTCTTAGAGGACTTGAGGTCAAAGAAGGATGAGAGAGTCAAGGAAATATTAAAAATAGAGTCCCAAATTTCTCAGATATGTGCTGAAATAGCAGGCTCTGGACAGTCCAAAGGTGTCACAGATCAAGATAATGATCAATTTGATCTGACCATGGAGAAATTGGGGGAACTCAAATCGCATCTTCATGAACTTCAAAATGAAAAGATCTTACGCCAGCAGAAAGTGAAGAGTCATATCAGTACTATCAGCGAGCTTTCAGCAGTAATGTCAATTGATATTTGGAAGACTTTAAATGACATCCACCCAAGCTTGAGTGATTCATCAAATGGTGCACCACAATGCATTAGTAACGACACTCTTGCTAGATTAACTGGGGTTGTTCTTTCATTAAAGCAGGAAAAGCAACAAAGGCTACAAAAGGTACAAGAACTTGCTAAGTTTTTGGTAGAGTTATGGGATCTTATGGAGATACCAATTGATGAGCAAAAGGCCTTTAGCCATGTTACTAGATTAATTTCAGCATCAGTTGATGAAGTGTCAATCCAAGGGGGCCTTTCTGGTGATGTCATTGAGCAGGTTGAGGTTGAAGTTCAGCGCTTAACTGTTTTGAAAGCCAGTAAGATGAAGGAAATAGTGTTTAAAAGACAGAATGAACTTGAAGAAATTTACAGAGGAGTTCACATGGATATGGATACTGAAGCTGCTAGACAGATTCTGACCAGCCTCATAGAATCTGGTAATGTTGATATGTCTGAATTGCTTCAAAGCATGGATGACCAAATCAGGAACGCCAAAGAGCAAGCTCTAAGCAGAAGAGATATTTTAGATAGGGTGGAGAAATGGAAATTTGCAGCTGAGGAGGAAAAGTGGTTAGATGAATATGAAAGGGATGAAAATCGATATACTGCAGTAAAAGGAGCACACAAAAATTTGAAGCGTGCGGAGAAAGCACGGATTCTTGTCAGCAAGATTCCATCTATGGTAGAGAATTTGACTGCAAAAGTGAAAGCATGGGAGACGGAAAAAGGAATACCTTTCTTATATGAAAAGGTTCCGTTGTTGCATAGCTTGGATGAATACAACGTACAACGGCAACTGAGAGAAGCAGAGAAGCGAAAATCTCGGGAGCAGAAGCGGCTTAATGAACAACTTGCTGTAGAGCAAGAAGCAATGTTTGGTTCAAGATCTGCAACAAAGAAACCTCTGAACCAGAGCTCTCATGTTAACACCATGGCTGGGACACCAACCGGGCGCCGAATGCATACTCCTTCGAGCCGTTATGGAACCTCGGGTGCAAAGGATCGCAGAGAAAGTGGCAGAGTGAATAACATAATTCCAGTGAACTATGTTGCTCTTCAAAAAGATGATTCTGTTTCAAGGGGCAATTAA 1707 0.4206 MASSPPSFSPSRTTCASLLRQLQVIWDEIGESDTDRDNMLLQLEQECLDIYHRKVEDTRKHKADLNKWLDEAESEVADIASSLGDDCVLFSRGKGTLKQQLANIRPVLEDLRSKKDERVKEILKIESQISQICAEIAGSGQSKGVTDQDNDQFDLTMEKLGELKSHLHELQNEKILRQQKVKSHISTISELSAVMSIDIWKTLNDIHPSLSDSSNGAPQCISNDTLARLTGVVLSLKQEKQQRLQKVQELAKFLVELWDLMEIPIDEQKAFSHVTRLISASVDEVSIQGGLSGDVIEQVEVEVQRLTVLKASKMKEIVFKRQNELEEIYRGVHMDMDTEAARQILTSLIESGNVDMSELLQSMDDQIRNAKEQALSRRDILDRVEKWKFAAEEEKWLDEYERDENRYTAVKGAHKNLKRAEKARILVSKIPSMVENLTAKVKAWETEKGIPFLYEKVPLLHSLDEYNVQRQLREAEKRKSREQKRLNEQLAVEQEAMFGSRSATKKPLNQSSHVNTMAGTPTGRRMHTPSSRYGTSGAKDRRESGRVNNIIPVNYVALQKDDSVSRGN* 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g1852 568 Gene3D - 368 500 - -
Mal5g1852 568 PANTHER 65-KDA MICROTUBULE-ASSOCIATED PROTEIN 5 12 563 - -
Mal5g1852 568 PANTHER PROTEIN REGULATOR OF CYTOKINESIS 1 PRC1-RELATED 12 563 IPR007145 GO:0000226|GO:0008017
Mal5g1852 568 Coils Coil 353 373 - -
Mal5g1852 568 Pfam Microtubule associated protein (MAP65/ASE1 family) 17 509 - -
Mal5g1852 568 Coils Coil 108 128 - -
Mal5g1852 568 Coils Coil 469 492 - -
Mal5g1852 568 Coils Coil 237 257 - -
Mal5g1852 568 MobiDBLite consensus disorder prediction 503 535 - -
Mal5g1852 568 MobiDBLite consensus disorder prediction 497 545 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g1852 Mal-Chr5 38421114 38429751 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g1852 13 534 EF-hand Containing Proteins AT5G62250 36.765 1.33e-94 298