Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g1841 ATGGCATCCTCAAACTCACCATGTGCAGCATGCAAGTTTCTACGCCGCAAGTGCCAACCAGAATGTGCATTTGCACCTTATTTTCCACCTGATCAGCCACAAAAATTTGCAAATGTTCATAGAATTTTTGGAGCAAGTAATGTTACAAAGCTTCTCAATGATTTACACCCTCACCAACGTGAAGACGCAGTTAATTCACTTGCTTATGAAGCTGAGATGAGACTTCGTGATCCTGTTTATGGTTGTGTAGGTGTAATTTCTCTCTTACAACATCAACTTCGTCAGCTTCAAATGGATCTTTATTGCGCTAAATCCGAACTCTCTCGGTACCAAAACTTGAGCATCACCGGTCATGGACTCATAACCGGTATGACAAGTGATCAATCTGTAACGGCCGTTAATAATTACCACCACATGCAGAATACTGCTGGTGGTGGTCATAACAGTAACGGCCGTGACCATCGTTATCATCATCAATTTTTTCCGAGGGATCAACATCAACAACATAATTTGGTTAGAAACTTTGATTCTAGTATTGGAAACAACTATGATGCTAGTCTTTTGGCTATGAATATATCTGCTAGCTTAGGACAAATCAATCAGCTTCAACATCATAGTGCCGCCGGTGGTGGTGGTGGTGGCGGCGAAGACCGCCGTACTATTAACCGCTCCTAG 675 0.4252 MASSNSPCAACKFLRRKCQPECAFAPYFPPDQPQKFANVHRIFGASNVTKLLNDLHPHQREDAVNSLAYEAEMRLRDPVYGCVGVISLLQHQLRQLQMDLYCAKSELSRYQNLSITGHGLITGMTSDQSVTAVNNYHHMQNTAGGGHNSNGRDHRYHHQFFPRDQHQQHNLVRNFDSSIGNNYDASLLAMNISASLGQINQLQHHSAAGGGGGGGEDRRTINRS* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g1841 224 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 3 180 - -
Mal5g1841 224 PANTHER LOB DOMAIN-CONTAINING PROTEIN 6-LIKE 3 180 - -
Mal5g1841 224 ProSiteProfiles LOB domain profile. 6 107 IPR004883 -
Mal5g1841 224 MobiDBLite consensus disorder prediction 204 224 - -
Mal5g1841 224 Pfam Lateral organ boundaries (LOB) domain 7 103 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g1841 Mal-Chr5 38054572 38055246 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g1841 2 224 AS2 family AT1G65620 60.987 2.39e-79 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mal5g1841 LOB 3.3e-42 No_clan