Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g1807 ATGGCAGCTTCATTAGGAGGCGGAAGTGTGGAGTGGCACGTGCGTCCTCCAAACCCTAAAAACCCAATCGTCTTCTTTGATGTTACCATCGGCAACATCCCCGCCGGTAGAATCAAAATGGAACTCTTCGCTGATATTGCCCCTAAAACCGCCGAGAATTTCAGGCAGTTCTGCACGGGGGAGTACAGGAAAGCCGGACTTCCTATTGGTTACAAGGGTTGTCAATTTCATAGAGTGATTAAGGATTTTATGATTCAGGCTGGTGATTATGTAAAGGGTGATGGTAGTGGATGTGCTTCAATCTATGGACTCAAGTTTGATGACGAGAATTTCACTGCCAAACACACTGGACCTGGTCTTCTATCAATGGCAAACAGTGGACCAAATACCAATGGTTGCCAGTTCTTTATAACTTGTGCAAAATGTGACTGGCTGGACAACAAGCATGTCGTTTTTGGGAGAGTGCTTGGAGATGGTCTTTTGGTTGTGAGGAAGATTGAGAATGTTGCAACTGGACCCAATAACCGGCCAAAACTAGCTTGTGTCATTGCTGAATGTGGTGAGATGTAA 570 0.4544 MAASLGGGSVEWHVRPPNPKNPIVFFDVTIGNIPAGRIKMELFADIAPKTAENFRQFCTGEYRKAGLPIGYKGCQFHRVIKDFMIQAGDYVKGDGSGCASIYGLKFDDENFTAKHTGPGLLSMANSGPNTNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPKLACVIAECGEM* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g1807 189 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 71 88 IPR020892 GO:0003755|GO:0006457
Mal5g1807 189 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE H 18 189 - -
Mal5g1807 189 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 25 188 IPR002130 GO:0000413|GO:0003755
Mal5g1807 189 SUPERFAMILY Cyclophilin-like 12 189 IPR029000 -
Mal5g1807 189 CDD cyclophilin_ABH_like 22 187 - -
Mal5g1807 189 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 76 88 IPR002130 GO:0000413|GO:0003755
Mal5g1807 189 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 147 162 IPR002130 GO:0000413|GO:0003755
Mal5g1807 189 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 42 57 IPR002130 GO:0000413|GO:0003755
Mal5g1807 189 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 119 134 IPR002130 GO:0000413|GO:0003755
Mal5g1807 189 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 134 146 IPR002130 GO:0000413|GO:0003755
Mal5g1807 189 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 26 187 IPR002130 GO:0000413|GO:0003755
Mal5g1807 189 PIRSF Peptidylpro_ismrse 11 189 IPR024936 GO:0003755
Mal5g1807 189 Gene3D - 11 189 IPR029000 -
Mal5g1807 189 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 18 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g1807 Mal-Chr5 36970849 36977276 Transposed