Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g1767 ATGAACATGTTAGGCTTAAGAGACTTGGTTCTCATAGCTCAAACTCCTTCATCACTTCACAACCAACAAAACCAACCCATTTCATCAGATCACAATCCAAACATTCCTTTACCTTCATCATCAGCTCTAAGTGTTGGTCTTGGAATTTTCCCTCTCCTAACCACCACTCACCCTCATCATCAAAATCACAACAACAACAACAATGATAGTATTCAAGACTCAAACTTTTGGAATCTCAAGATGTGTCAACCACAACAAGTAATGTTGATGAACTCCACAAGAAAAAGGGTTGAAGAAGAAGAAGAAGAAGAAGAAGAAAATGATGTAAAAAACAAAAATATGATGATGAGGTGTGAGGAAAATGGTGAGTTTAGGGTGTGTCAAGATTGTGGAAACAGAGCTAAGAAAGATTGTAGCTATAAAAGATGCAGGACGTGTTGTAAAGGTCGTGGATTTGATTGTAGTACTCACGTGAAGAGCACGTGGATACCGGCTTCGATGCGGCGGGATCGGAATGTGGTGGTGGCTGAAGGTGGTGTTTCTTCTGGTACTAAGAGGCAAAGGATTTTGGTGTCATCATCACATAATAATGCTGCTGCTAACTCTCATAGCTCTAGTTCTAATGCTGCTACTACAAGAAGCTTAAGCTTAGATATAACTAGCTCTTGTCACCAAGATCCTGGTTTCAAACAGTCTTTACCACGTTATGTTCGTGCACCTGCTGTTTTCAAGTGCCATAGAGTTTCTGCTATTGGCAATGGTGAAGATGAACTTGCTTACCTAGCCACTGTGAATATTAGTGGTCATGTTTTCAAAGGGTTTCTTTATGATCAAGGTGTTGATGGAAAAAATGAAACAATGCCTTGTGTTTCAGAACTTCAACTTGGAAGTAATGGAAGTGGAAAGAGTAATAGAGAATGTTCTTCTTCTGCAATTGATGTTCCAACTAGTGCTTACCCTGCTTCTGCTTGTTGA 975 0.3979 MNMLGLRDLVLIAQTPSSLHNQQNQPISSDHNPNIPLPSSSALSVGLGIFPLLTTTHPHHQNHNNNNNDSIQDSNFWNLKMCQPQQVMLMNSTRKRVEEEEEEEEENDVKNKNMMMRCEENGEFRVCQDCGNRAKKDCSYKRCRTCCKGRGFDCSTHVKSTWIPASMRRDRNVVVAEGGVSSGTKRQRILVSSSHNNAAANSHSSSSNAATTRSLSLDITSSCHQDPGFKQSLPRYVRAPAVFKCHRVSAIGNGEDELAYLATVNISGHVFKGFLYDQGVDGKNETMPCVSELQLGSNGSGKSNRECSSSAIDVPTSAYPASAC* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g1767 324 Coils Coil 87 107 - -
Mal5g1767 324 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 2 324 IPR007818 GO:0003700|GO:0006355
Mal5g1767 324 TIGRFAM put_zinc_LRP1: putative zinc finger domain, LRP1 type 126 168 IPR006510 -
Mal5g1767 324 Pfam Domain of unknown function (DUF702) 126 281 - -
Mal5g1767 324 PANTHER LRP1 CARBOXY-TERMINAL DOMAIN PROTEIN 2 324 - -
Mal5g1767 324 TIGRFAM LRP1_Cterm: LRP1 C-terminal domain 233 280 IPR006511 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g1767 Mal-Chr5 35550604 35552423 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Mal5g1767 DUF702 6.7e-54 No_clan