Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g1761 ATGACTTCTGAATTGGTTGTTTCACCCAAGTGTTCTTGGGGTTATGGTAGTTCCGTTCTTAAACGGTGGCATCACCTATTTGTTGAGGTGCTTGATCTGAAAAGATTTGTATTAGTTGGGCAGTGCTGTAGATTTACCAAGGTAGTCATGATGGAAGATAATCCTACTACATCCCTTTTGGAAGGGAAGGTTGTTGGCATCCGCTTCAGTATGGCTACACGCCATGAAATTAGTACTGCATCGATTAGCGATTCACAAATTAGCCATGCGAGTCAACTCGCAAATCCTTTCCTTGGGCTTCCGCTTGAGTTTGGAAGGTGCGAGTCTTGTGGCACTTCTGAAGCAGGAAAATGCGAAGGCCACTTTGGATATATTGAACTTCCAGTTCCAATATACCATCCGAGTCATGTCACTGAGCTGAAGAAAATACTGAGTCTGGTCTGCTTAAGCTGCCTGAAATTGAAGAAAACCAAGGTACCTTCTTCAAGCAGTGGTTTGGCACAGAGATTATTATCTCCTTGCTGTGAGGACGTTAATGCTGCGCAAGTTTCTATTCGGGAGGTTAAAACAGCTGATGGGGCTTGTTACTTGGCACTGAAGGTGCCAAAGTCAAAGATGCATGACAGCTTTTGGAGCTTTTTAGAGAAATATGGCTATCGCTATGGCGGTGATCATACTCGAGCTTTGCTTCCTTGTGAGGCGATGGAAATTATCAAGAGAATTCCGCAAGAAACAAAAAAGAAACTTGCCGGAAAAGGATTTTTTCCTCAAGATGGATATGTGTTGAAATACCTTCCTGTACCACCAAATTGCTTGTCTGTGCCAGTAGTTTCAGATGGTGTCAGTATCATGTCTTCGGATCCTGCCATGACAATACTCAGAAAATTGCTTAGGAAGGTTGAAGTCATCAGAAGTTCTAGATCTGGTGAACCAAACTTTGAGTCTCATCAAGTGGAAGCTAACGATTTGCAATCCGTGGTCGATCAGTATCTTCAAATCAGGGGAACTTCTAAGGCCGCACGTGATATTGAAACCCATTATGGTGTCAACAAAGAGCTGAATGAGTCCTCAACAAAAGCATGGTTAGAGAAAATGAGGACTTTATTTATAAGAAAGGGTTCAGGGTTTTCTTCCCGGAATGTGATAACTGGAGATGGCTATAAGAAAATTAATGAAGTTGGAATTCCGCTTGAGGTTGCCCAAAGGATAACCTTTGAGGAAAGAGTTAGCATACACAACATCCATTATTTACAAAAGTTGGTTGATGAAAACTTGTGCTTGACATACAAGGAAGGTCTGTCAACTTACTCACTGAGGGAGGGATCAAAGGGGCACACTTATCTTAAACCTGGTCAGATAGTGCACCGGAGGATTATGGACGGGGATACCGTTTTCATCAACAGACCGCCAACTACCCACAAGCACTCCTTGCAAGCGCTTGTGGTGTACATCCACGACGACCACACGGTCAAAATTAATCCACTAATTTGTGGACCCCTTGGAGCGGATTTTGATGGTGACTGTGTCCATCTTTTTTATCCCCAGTCTCTCGCTGCTAAAGCAGAGGTTTTGGAGCTTTTCTCTGTAGAGAAACAACTTCTCAGCTCTCATAGTGGCAATCTGAACCTTCAGTTATCCTCAGATTCATTATTGTCACTCAAGATGCTAGTCAAGAGTTGTTTTTTGGATAGAGCAGCAGCAAATCAAATGGCAATGTTTCTTTCACTGCCTTTGCCAATGCCTGCTTTACTTAAGGCCAGTACTGGTAATTCTTATTGGACATCTATTCAAATGTTGCAGTGTGCTTTGCCTTTCTCGTTTGATTGTACTGGAGGACAATACTTGATTAGACAGAGGGAAATCTTAGAATTTGACTTTACCAGAGATGTCTTGCCTTCAGTTATTAATGAAATAGCGGCCTCAATTTTTTTTAGCAAGGGTCCTCAGGAGGCACTCAATTTCTTTGATGTGATACAGCCCTTTCTGATGGAAAACATATTTGCTCATGGATTTAGTGTTGGATTACAAGACTTCTCAATATCTAGGGCGGTGAAAAGGGTTATAAATAGAAGCATTGGGAAAGTTTCTCCTTTGTTGCGTCAGCTGAGGGGCATGTACGAAGAGCTGGTGGCTCAACAACTGGAGAAAGTCATTCAAGATATTGAACTTCCAGTTATAAATTTTGCTTTGAAGTCAACCAAACTTGGAGATTTGATTGATTCAAAGAGTAAGTCAGCGGTTGACAAGGTGGTTCAACAAATTGGCTTTTTAGGCCAACAACTCTTCGAGAGAGGAAAGTTTTACTCCAAGGGATTGGTTGAGGATGTAGCTTCTCATTTTCACGTGAAGTGTTTCTATGATAAGGATGATTATCCCTCTGCCGAGTTTGGTTTGCTCAAAGGATGCTTCTTTCATGGTTTAGATCCATATGAAGAGTTGGTGCATTCAATTGCAACGAGAGAAATACTTGACCGCTCTTCTAGAGGATTATCTGAACCAGGCACACTATTCAAGAACTTGATGGCCATTCTCCGCGACGTTGTTATTTGCTATGATGGAACTGTGAGGAATGTATGTAGTAATTCCATCATCCAGTTTGAATATGGCATACAATCTAGAGATGCAGCCCAACACTTATCCCCTGCTGGTGAGCCTGTAGGTGTCTTAGCTGCAACTTCAATGTCAAACCCTGCTTATAAAGCAGTCCTTGATGCTAGTCCTAGCAGTAATTCTTCGTGGGGATTTATGAAGGAAATACTCCTTTGCAAGGTAAACTTCAGGAATGAACCAAACGATCGTCGTGTAATTTTGTATTTAAATGATTGTGATTGTGGGAGGAATTATTGTCGTGAAAATGCTGCATATTTGGTTAAAAATCAATTGAGAAAAGTAAGCCTCAAGGATGCAGCACTAGATTTCATTGTTGAATACCAGCAGCAACGAAGACGCATTGATGGTACTGAAGATGCAGGCCTTGTTGGTCATATTCGTCTAAATGAGGCGATGTTAGAGAAGCTGAAGATCAATATGACTGAAGTTTACCAAAAATGCCAAGAGAGACTCAATTCCTTTAGTCGGAAGAAGAAAGTTTTCCCATTTTTTAAGAGAACTGAATTGTCTTTCAGTGAGTCTTGCTCTTCTCCGAATTATTCTGCCCCTTGTGTAACATTCCTTTGGCCGGGTGATGATTTAGACCAAACCACCAAAATCCTTGCTGACATGATCTGCCCAGTTCTGTTAGAATCAATAATTCAAGGAGACCCTCGTATCAGCTCCGCAAATATAATCTGGGTTAATCCTGGCACGAACACATGGGTCCGTAACCCATCCAAATCTTCTAATGGTGAATTAGCACTGGACGTCATTCTTGAGAAGGAAGCTGTTAAACAAAGTGGTGATGCTTGGAGGATTGTACTCGATTCCTGCCTTCCTGTTCTTCATTTGATTGATACCAGGCGTTCTATCCCTTATGCTATTAAGCAAATTCAGGAATTACTGGGCATTGCATGTACTTTTGATCAAGCGATTCAGCGTCTTGCAGCATCAGTAAGAATGGTGGCAAAAGGTGTTCTCAGAGAGCATCTCATTCTCTTAGCAAGTAGTATGACTTGTGGTGGAAATTTGGTCGGTTTTAATACAGGTGGTTATAAAACACTTGCTCGCCAATTAAACATTCAAGTACCATTCACAGATGCGACACTCTTTACTCCTAGAAAATGCTTTGAAAGAGCTGCTGAGAAACACCACGCAGACTCTTTGTCAAGCATCGTTGCCTCCTGTTCCTGGGGTAAACATGTGGCGGTTGGTACAGGGTCAAAATTTGATATTGTATGGGATCCCAAAGAGATAAAAACAAACGAGATTGAAGGGATGAATGTTTACAATTTTCTTCACATGGTCAAAGGCCTTGCCAACGGGGAAGAAGAAAACAATGCTTGTTTGGGCGAGGACATTGATGGTTTGTTCGACGATGAAATTGGGGACTTTGACATGTCCCCACAGCATGCCTCTGTCTTTGACGCTGTCTTTGATGAGACTTTCGAACTACCGAATGGCTCAACATCAAATGGTTGGGATTCAAATAAAGAACAGATTGATCAGATTATCCCAGAAGACTCTTCAAAGTCTAGTGCTTGGGGGGCTGCAACAAATCAAAATAGTGATCAGTCTTCTTGGGGTAAAGCTAAATTGGCAGAACCAGAAGACTCTTCAAAGTCTAATGCTTGGGGGGCTGCAACAAATCAAAATAGTGATCAGTCTTGGGGTAAAATTAAACCTGCAGCACCAGAAGACTCTTCGAAGTCTACTGCTTGGGGGGCTGCTGCCACAAATCAAAATAGTGATCAATCTTCTTGGGGTAAAGCTAAACCGGTGGTCCAAGAAGACTCTTGGGGGGCTGCAACAAATCAAAATAGTGATCAGTCTTCTTGGGGTAAAGCTAAATTGGCAGCACCAGAAGACTCTTCAAAGTCTACTGCTTGGGGGGCTGCAACAAATCAAAATAGTGATCAGTCTTGGGGTAAAATTAAACCTGCAGCACCAGAAGACTCTTCGAAGTCTACTGCTTGGGGGGCTGCTGCCACAAATCAAAATAGTGATCAATCTTCTTGGGGTAAAGCTAAACCGGTGGTCCAAGAAGACTCTTGGGGGGCTGCAACAAATCAAAATAGTGATCAGTCTTCTTGGGGTAAAGCTAAATTGGCAGCACCAGAAGACTCTTCAAAGTCTACTGCTTGGGGGGCTGCAACAAATCAAAATAGTGATCAGTCTTGGGGTAAAATTAAACCTGCAGCACCAGAAGACTCTTCGAAGTCTACTGCTTGGGGGGCTGCTGCCACAAATCAAAATAGTGATCAATCTTCTTGGGGTAAAGCTAAACCGGTGGTCCAAGAAGACTCTTGGGGGGCTGCCACAAATCAAAATAGTGAGCAATCTTCTTGGGGTAAAGCCAAAGCGGTGGTCCAAGAAGACTCTTGGGGGGCTGCCACAAATCAAAATAGTGATCAGCCTTCTTGGGGTAAAACAAAATCTGCAGCGCAAGAGGATGGAGCAGTAGAAAGCATGCAATGGGAGTCCGGTAGCTCTCAAAAGTGGAAATCTGATGTTATCCATGACTCTTCAAAGTCTGGTGCTTGGGAGGCCAACAAAAATCAAAATAGTGATCAGTCTTCGTGGGGTAAAAAGAAATCGGTAATACAAGATGGAGCAGAAAAGGCCAAGTGGGAGTCTGGGAGCTCTCAAAAGTGGAAAGCTGGTGTTGTCCAAGAAGACGACTCTTCAAAGTCTGGTGCTTGGGAGGCCAACACAAATCAAAACATTGATCAGTCCTCTTGGGGAAGAAATAAAACTGGAGTGCAAGGTGATGGAGAGGAAAAGGCCCAAGGAGAGTTTGGGGGCATTCAAAAATGGAAAGCTGATGTCATCCCAGAAGACTCGACAAACTCGGGTGGTTGGAAAGCTTGGGGAAGAAGTAAACCTGAAGCACATGAGGCCAACACAAATCAAAACAGTGGTCAGTCCTCTTGGGGAAGAAATAAAACTGGAGTGCAAGGTGATGGAGAGGAAAAGGCCCAAGGAGAGTCTGGGGGCATTCAAAAATGGAAAGCTGATGTTATCCCAGAAGACTCGACAAACTCGGGTGGTTGGAAAGCTTGGGGAAGAAGTAAACCTGAAGCACATGAGGGTGAGTCTATAAAAGTACAAGAAGATTCTTGGAACTCTCAGAAATGGAAAGCTGGAGCAGATGTTACCATAGAAGACTCTCAGAAGTCTAGTGCTTGGGGTGGAATCAAAGATGCAACTAAACCGAAGTTGAATGATAGGTCCTCCTGGGGAAAGAAAAAAGATGAAGAAGACTCTTCTAGATCTAATGCTTGGGAACAGAAGCCGGACAGTGTAAAGGACAGTTGGGATGCCAAAGTGCCAGTTGCCAATAGCTCTTGGGGAAAGTCCAAATCACCAGAAAACCTACCTTGGGATTTGAAGAACGAATCAAATAGCTCTTTGGGAAAACCTAATTCACAAGAAAACCAGCCCTGGGATTCCAAAAACGACTCAAATCAAGCTGCAAATTCACGTGGATGGGACTCTCAAGTTGCTTCTGCTAACTCTGAAAGCGACAGAAGTTTTCAATGGGGTAAGCAAGGAAGAGGAGATTCATTTAAGAAAAATCGTTTTGAAGGTTCACAAAGTGGGGGTCCAAATGCTGGGGACTGGAAAAATAGGAGTCGTCCTGCCAGACCACCACCTGGACAGAGGTTCGAATTATACACTCCTGAGGAGCAAGATATTATCAAGGACATTGAACCTATTGTGCAGTCCATTAGAAGAATCATGCAACAACTAGGGTACAATGACGGAGATCCACTAGCTGATGAAGACCAAAAATATGTGCTTGAGAATGTCTTTGAACATCATCCAGATAAAGAAACAAAAATGGGTGGTGGAATTGATCATGTCATGGTTAGCAGGCACAGCAATTTTCAGGACAGCAGATGCTTGTATGTGGTTTTAAAAGATGGTAAAAAAGAAGACTTTTCGTACCGGAAGTGCCTGGAAAACTTGGTGAGGAAGAAATATCCGGAGACTGCTGAATCTTTCTGCGGCAAATATTTCAGGAAACCCCAACCCCGTGTAAAGAAGGACCAGACGCCAAATCCAGCTGGAGAGCAGACTGCAACTCCAAATCCAGCAGGGGAGCAGACCTCAACTTTAAATCCAGCAGGGGAGCAGAGCTCAACTCCAAATCCAGCAGGAGAGCAGACTGCAACTCCGAATCCGGCAGGGGAGCAGACCTCAACTCCGAATCCAGCAGGGGAGCAGACCTCAACTCCGAATCCAGCAGGGGAGCAGACGTCAACTCTAAATCCAACAGAGGAGCAGACCACTACTCCAGCTGGGGATCAGACATCAAACCCCGGTGCATATGGAAACCAATGA 6939 0.4348 MTSELVVSPKCSWGYGSSVLKRWHHLFVEVLDLKRFVLVGQCCRFTKVVMMEDNPTTSLLEGKVVGIRFSMATRHEISTASISDSQISHASQLANPFLGLPLEFGRCESCGTSEAGKCEGHFGYIELPVPIYHPSHVTELKKILSLVCLSCLKLKKTKVPSSSSGLAQRLLSPCCEDVNAAQVSIREVKTADGACYLALKVPKSKMHDSFWSFLEKYGYRYGGDHTRALLPCEAMEIIKRIPQETKKKLAGKGFFPQDGYVLKYLPVPPNCLSVPVVSDGVSIMSSDPAMTILRKLLRKVEVIRSSRSGEPNFESHQVEANDLQSVVDQYLQIRGTSKAARDIETHYGVNKELNESSTKAWLEKMRTLFIRKGSGFSSRNVITGDGYKKINEVGIPLEVAQRITFEERVSIHNIHYLQKLVDENLCLTYKEGLSTYSLREGSKGHTYLKPGQIVHRRIMDGDTVFINRPPTTHKHSLQALVVYIHDDHTVKINPLICGPLGADFDGDCVHLFYPQSLAAKAEVLELFSVEKQLLSSHSGNLNLQLSSDSLLSLKMLVKSCFLDRAAANQMAMFLSLPLPMPALLKASTGNSYWTSIQMLQCALPFSFDCTGGQYLIRQREILEFDFTRDVLPSVINEIAASIFFSKGPQEALNFFDVIQPFLMENIFAHGFSVGLQDFSISRAVKRVINRSIGKVSPLLRQLRGMYEELVAQQLEKVIQDIELPVINFALKSTKLGDLIDSKSKSAVDKVVQQIGFLGQQLFERGKFYSKGLVEDVASHFHVKCFYDKDDYPSAEFGLLKGCFFHGLDPYEELVHSIATREILDRSSRGLSEPGTLFKNLMAILRDVVICYDGTVRNVCSNSIIQFEYGIQSRDAAQHLSPAGEPVGVLAATSMSNPAYKAVLDASPSSNSSWGFMKEILLCKVNFRNEPNDRRVILYLNDCDCGRNYCRENAAYLVKNQLRKVSLKDAALDFIVEYQQQRRRIDGTEDAGLVGHIRLNEAMLEKLKINMTEVYQKCQERLNSFSRKKKVFPFFKRTELSFSESCSSPNYSAPCVTFLWPGDDLDQTTKILADMICPVLLESIIQGDPRISSANIIWVNPGTNTWVRNPSKSSNGELALDVILEKEAVKQSGDAWRIVLDSCLPVLHLIDTRRSIPYAIKQIQELLGIACTFDQAIQRLAASVRMVAKGVLREHLILLASSMTCGGNLVGFNTGGYKTLARQLNIQVPFTDATLFTPRKCFERAAEKHHADSLSSIVASCSWGKHVAVGTGSKFDIVWDPKEIKTNEIEGMNVYNFLHMVKGLANGEEENNACLGEDIDGLFDDEIGDFDMSPQHASVFDAVFDETFELPNGSTSNGWDSNKEQIDQIIPEDSSKSSAWGAATNQNSDQSSWGKAKLAEPEDSSKSNAWGAATNQNSDQSWGKIKPAAPEDSSKSTAWGAAATNQNSDQSSWGKAKPVVQEDSWGAATNQNSDQSSWGKAKLAAPEDSSKSTAWGAATNQNSDQSWGKIKPAAPEDSSKSTAWGAAATNQNSDQSSWGKAKPVVQEDSWGAATNQNSDQSSWGKAKLAAPEDSSKSTAWGAATNQNSDQSWGKIKPAAPEDSSKSTAWGAAATNQNSDQSSWGKAKPVVQEDSWGAATNQNSEQSSWGKAKAVVQEDSWGAATNQNSDQPSWGKTKSAAQEDGAVESMQWESGSSQKWKSDVIHDSSKSGAWEANKNQNSDQSSWGKKKSVIQDGAEKAKWESGSSQKWKAGVVQEDDSSKSGAWEANTNQNIDQSSWGRNKTGVQGDGEEKAQGEFGGIQKWKADVIPEDSTNSGGWKAWGRSKPEAHEANTNQNSGQSSWGRNKTGVQGDGEEKAQGESGGIQKWKADVIPEDSTNSGGWKAWGRSKPEAHEGESIKVQEDSWNSQKWKAGADVTIEDSQKSSAWGGIKDATKPKLNDRSSWGKKKDEEDSSRSNAWEQKPDSVKDSWDAKVPVANSSWGKSKSPENLPWDLKNESNSSLGKPNSQENQPWDSKNDSNQAANSRGWDSQVASANSESDRSFQWGKQGRGDSFKKNRFEGSQSGGPNAGDWKNRSRPARPPPGQRFELYTPEEQDIIKDIEPIVQSIRRIMQQLGYNDGDPLADEDQKYVLENVFEHHPDKETKMGGGIDHVMVSRHSNFQDSRCLYVVLKDGKKEDFSYRKCLENLVRKKYPETAESFCGKYFRKPQPRVKKDQTPNPAGEQTATPNPAGEQTSTLNPAGEQSSTPNPAGEQTATPNPAGEQTSTPNPAGEQTSTPNPAGEQTSTLNPTEEQTTTPAGDQTSNPGAYGNQ* 2313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g1761 2312 Pfam RNA polymerase Rpb1, domain 3 532 677 IPR007066 GO:0003677|GO:0003899|GO:0006351
Mal5g1761 2312 SUPERFAMILY beta and beta-prime subunits of DNA dependent RNA-polymerase 63 1281 - -
Mal5g1761 2312 Pfam RNA polymerase Rpb1, domain 5 806 1218 IPR007081 GO:0003677|GO:0003899|GO:0006351
Mal5g1761 2312 Pfam RNA polymerase Rpb1, domain 2 375 529 IPR000722 GO:0003677|GO:0003899|GO:0006351
Mal5g1761 2312 SMART rpolaneu7 258 557 IPR006592 GO:0003677|GO:0003899|GO:0006351
Mal5g1761 2312 MobiDBLite consensus disorder prediction 1370 2093 - -
Mal5g1761 2312 MobiDBLite consensus disorder prediction 1436 1456 - -
Mal5g1761 2312 MobiDBLite consensus disorder prediction 1761 1783 - -
Mal5g1761 2312 MobiDBLite consensus disorder prediction 1979 2046 - -
Mal5g1761 2312 MobiDBLite consensus disorder prediction 1548 1563 - -
Mal5g1761 2312 Gene3D RNA polymerase ii 404 456 - -
Mal5g1761 2312 MobiDBLite consensus disorder prediction 1521 1541 - -
Mal5g1761 2312 MobiDBLite consensus disorder prediction 1463 1478 - -
Mal5g1761 2312 PANTHER DNA-DIRECTED RNA POLYMERASE 247 1429 IPR045867 GO:0003899|GO:0006351
Mal5g1761 2312 MobiDBLite consensus disorder prediction 2208 2312 - -
Mal5g1761 2312 Pfam RNA polymerase Rpb1, domain 1 87 332 IPR007080 GO:0003677|GO:0003899|GO:0006351
Mal5g1761 2312 MobiDBLite consensus disorder prediction 1406 1422 - -
Mal5g1761 2312 MobiDBLite consensus disorder prediction 1370 1393 - -
Mal5g1761 2312 MobiDBLite consensus disorder prediction 1710 1729 - -
Mal5g1761 2312 MobiDBLite consensus disorder prediction 1576 1592 - -
Mal5g1761 2312 MobiDBLite consensus disorder prediction 1606 1626 - -
Mal5g1761 2312 MobiDBLite consensus disorder prediction 1491 1507 - -
Mal5g1761 2312 Pfam Protein of unknown function (DUF3223) 2111 2185 - -
Mal5g1761 2312 Gene3D RNA polymerase Rpb1, domain 3 537 672 IPR042102 -
Mal5g1761 2312 MobiDBLite consensus disorder prediction 2218 2312 - -
Mal5g1761 2312 PANTHER DNA-DIRECTED RNA POLYMERASE V SUBUNIT 1 247 1429 - -
Mal5g1761 2312 MobiDBLite consensus disorder prediction 1658 1676 - -
Mal5g1761 2312 MobiDBLite consensus disorder prediction 1828 1847 - -
Mal5g1761 2312 MobiDBLite consensus disorder prediction 1633 1651 - -
Mal5g1761 2312 Gene3D - 846 891 - -
Mal5g1761 2312 Gene3D RNA polymerase II, clamp domain 57 171 IPR044893 -
Mal5g1761 2312 MobiDBLite consensus disorder prediction 1934 1969 - -
Mal5g1761 2312 Gene3D - 372 536 - -
Mal5g1761 2312 Gene3D - 2098 2191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g1761 Mal-Chr5 35425793 35444399 Dispersed