Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g1702 ATGGCGGAGCAAAGTACCGCCACCGTCAACCACGGCGAATCACAACCGCAACAGAACGAACACCACCAAAACAACAACAACAACATCAGCGACGACAACAAGAAAGATAAGACTTCAGATCCAGAACTATTCTGCTGCCTGCTTCAGCCTATCACTGCCGACGCTGATCCTGAGTACACCGGCATTCGTCGTCTTCTTCTTCATCGGAAAGCTGAAGCTGGAGTTCTCCGCCGTAGGGATTGGAGATGCAATGGGAAAACTTACGTGGCATACCGGAATTACATATGCAGGCCGAGGAACTGGGAAAGTTTAGGACGAGCCCCAAGCCTTCAAACTACTCCGGGAAACAGTGGCCGATGGTTTCCATCTCCAAGTCCACTCTCCCGTTGGTCCGAGGTGGACAGCTGGAGTTCTGGGAGGGATGTCCAAGTTGCAAATTCAGTATCCAATCATAGAGCAAGTTTTGGCTCTGGCTCAAATGCAAGTGATTCTGATCGTCCAAGATTTCGTGGGGTTGAGCCTGCCTATTCCTTTGTAGGAATGCATTGCATCTTTGACCAGTGCAAAGCCTCTGTTACGGTGTTAAAGTTTGGGCACATGAGTTCTGACCTACTTGCTTATGGGGCATCAGATGGAACCTTGACTGTGTGCAGTGTTTCGGAGAAACCTTCAATCATCAAACAATTAAATGGGCATTCCAAAGATGTCACAGATTTTGATTTTACATCAAACAATCAGTACATTGCTTCCTCTTCGTTGGATAAAACTGTGAGAGTATGGGAGATAGAAAAAGGCAATTGCATGCGGGTGATATATGGAGTTTCTTCACAACTGTGTATCCGTTTCCACCCTGTAAATAACAACTTCCTTTCTGTTGGCAATGCAAACAAAGAAATCAATGTGTTCAATTTTAGCACTGGAAGGACAATTAACAAGGCGGTATTTGACGCTGAAGTTACCTCTATGGACCATGATCATACTGGTCATCTCATATTTTGTGGAGATGCGCAGGGATGTATATACTCTGTAAATATGAACTCCCACACAGGTATATTATCCCGCTCACATCGTCATCGAAGTAGCAGCAAACACAGATCTCCGGTCACAACAGTGCAGTATAGGAGTTTCTCTCTGCTGGCTCGAGGACCTGTGTTGTTGACCTGTACTCAGGATGGAAATCTATCTTTCTTCAGTGTGGCTTTGGAGATAAAAGGTTATTTAACTCTTCGTTGCTCGCTCAAATTAACTCCTCGGATACACAAAATTCAAGCTTCTTTCTGCCCCCTTCTTTCTCTTGAAAAAGGAGAATTCATTGTTGCTGGGAGTGAGGACTCAAATGTCTATTTCTATGATTTAACAAAGCCAAAGCATACATGTGTGAACAAGCTACAGGGTCATCGGTTTCCTGTGATGGGGATTGCTTGGAACCATGGAGAAAACTTTTTGGCATCATCTGATTTTTACGGCATAGTAATTGTTTGGAAGAGAGAAAGAACAAATCAGAACAAGAATACATAG 1518 0.4427 MAEQSTATVNHGESQPQQNEHHQNNNNNISDDNKKDKTSDPELFCCLLQPITADADPEYTGIRRLLLHRKAEAGVLRRRDWRCNGKTYVAYRNYICRPRNWESLGRAPSLQTTPGNSGRWFPSPSPLSRWSEVDSWSSGRDVQVANSVSNHRASFGSGSNASDSDRPRFRGVEPAYSFVGMHCIFDQCKASVTVLKFGHMSSDLLAYGASDGTLTVCSVSEKPSIIKQLNGHSKDVTDFDFTSNNQYIASSSLDKTVRVWEIEKGNCMRVIYGVSSQLCIRFHPVNNNFLSVGNANKEINVFNFSTGRTINKAVFDAEVTSMDHDHTGHLIFCGDAQGCIYSVNMNSHTGILSRSHRHRSSSKHRSPVTTVQYRSFSLLARGPVLLTCTQDGNLSFFSVALEIKGYLTLRCSLKLTPRIHKIQASFCPLLSLEKGEFIVAGSEDSNVYFYDLTKPKHTCVNKLQGHRFPVMGIAWNHGENFLASSDFYGIVIVWKRERTNQNKNT* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g1702 505 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 229 266 - -
Mal5g1702 505 SUPERFAMILY WD40 repeat-like 184 496 IPR036322 GO:0005515
Mal5g1702 505 PANTHER WD REPEAT-CONTAINING PROTEIN 13 24 499 - -
Mal5g1702 505 MobiDBLite consensus disorder prediction 106 126 - -
Mal5g1702 505 ProSitePatterns Trp-Asp (WD) repeats signature. 248 262 IPR019775 -
Mal5g1702 505 Gene3D - 277 425 IPR015943 GO:0005515
Mal5g1702 505 PANTHER WD REPEAT PROTEIN 26-RELATED 24 499 - -
Mal5g1702 505 MobiDBLite consensus disorder prediction 1 36 - -
Mal5g1702 505 Pfam WD domain, G-beta repeat 459 495 IPR001680 GO:0005515
Mal5g1702 505 Pfam WD domain, G-beta repeat 226 260 IPR001680 GO:0005515
Mal5g1702 505 SMART WD40_4 264 303 IPR001680 GO:0005515
Mal5g1702 505 SMART WD40_4 456 495 IPR001680 GO:0005515
Mal5g1702 505 SMART WD40_4 306 344 IPR001680 GO:0005515
Mal5g1702 505 SMART WD40_4 178 218 IPR001680 GO:0005515
Mal5g1702 505 SMART WD40_4 354 398 IPR001680 GO:0005515
Mal5g1702 505 SMART WD40_4 222 261 IPR001680 GO:0005515
Mal5g1702 505 SMART WD40_4 415 451 IPR001680 GO:0005515
Mal5g1702 505 MobiDBLite consensus disorder prediction 1 26 - -
Mal5g1702 505 Gene3D - 431 504 IPR015943 GO:0005515
Mal5g1702 505 ProSiteProfiles Trp-Asp (WD) repeats profile. 463 504 IPR001680 GO:0005515
Mal5g1702 505 ProSiteProfiles Trp-Asp (WD) repeats profile. 229 270 IPR001680 GO:0005515
Mal5g1702 505 Gene3D - 180 276 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g1702 Mal-Chr5 33561880 33569002 Transposed