Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g1698 ATGGGGTCAGAGAATAAAGGAGGAGGGATAGTGAAAGTGGAACCAAAACCCAACAATGGTTTCACTTCAAAAGCTGTTGATTTGTTAGAGAAGATTATTGTGAAGTTGTTTTATGATTCTTCACTTCCACATCATTGGCTTGCTGGTAATTTTGCACCTGTTAAGGATGAGACACCTCCTACTAAGGATCTTCCTGTTAAAGGACACCTTCCGGATTGCTTGAATGGAGAGTTTGTCAGGGTGGGACCCAATCCGAAGTTTTCTCCGGTGGCCGGATATCATTGGTTTGATGGAGATGGAATGATTCATGGTTTGCGCATCAAAGATGGAAAAGCTACATATGTTTCCCATTTCGTGAGGACTTCTCGCCTTAAACAAGAAGAATACTTTGGAGAAAAATTGAAAATACTTGATGTTTCTTATGGAACTGGAACAGCTAATACAGGTCTTGTGTATCACAATGGGAAGCTTCTAGCACTCTCCGAACGAGACAAACCTTATGCTATTAAAGTTTCTGAAGATGGTGATTTGCATACACTTGGTATGCTAGATTATGACAAGAGATTGGACCATTATTTCACTTCTCATCCAAAACTTGATCCCTTTACTGGGGAGATGTTTACTTTTGGATATGCACAAACACCACCATATATCACATACAGAGTAATTTCAAAAGATGGTTATATGCATGATCCTGTTCCAATAACAATATCAGATCCCATCATGATGCATGACTTCGCCATTACCGAAAATTATGCAATTTTTATGGATCTTCCTGTGTACTTTAGGCCAAAGGAAATGGTGAAGAATAACAAACTCATATTCTCTTTTGATTCAACCAAGAAAGCTCGTTTTGGTGTCCTACCTCGCTATGCTAAAGATGATAAGCTCATAAGATGGTTTGAATTGCCAAATTGCTTCATATTCCATAATGCTAATGCTTGGGAGGAGGAGGATGAAGTTGTTTTGATCACGTGCCGCCTGAAGAATCTAGATTTGGACATGGTCAGCGAGGATGTCAAGGATAAGCTTGAAAGTTTCTCAAATGAGCTGTATGAAATGAGGTTTAACATGAAAACCGGTAAAGCTTCTCAAAAGAAACTATCAGCATTTTCTGTAGATTTTCCTAGGGTGAATGAAAGATACACCGGCAGGAAACAGAAGTACGTATATGGAACCATATTAGACAGCATTACAACTGGGATTGTTAAATTTGATTTGAATGCCAAACCTGATTTCGGCAAAACAAAGCTTGAAGTTGGAGGAAACGTTCATGGTATCTATGACTTGGGACAGGGAACATTTTGCTCTGATCCTATTTATGTCCCACGCGTCCCTGGAACCGATTCTGAAGAAGATGATGGATACTTGATCTTTTTTGTACATGATGAGAATACTAGGAAATCGTTCGTGCATGTCATAGATGCAAAAACAATGTCAGCGGATCCTGTTGCAGTTGTAGAATTGCCTCAAAGAGTTCCATATGGTTTCCATGCCTTCTTTCTGACAGAGGACCAACTGCAAGAACAAGCCAAACTATAA 1542 0.3943 MGSENKGGGIVKVEPKPNNGFTSKAVDLLEKIIVKLFYDSSLPHHWLAGNFAPVKDETPPTKDLPVKGHLPDCLNGEFVRVGPNPKFSPVAGYHWFDGDGMIHGLRIKDGKATYVSHFVRTSRLKQEEYFGEKLKILDVSYGTGTANTGLVYHNGKLLALSERDKPYAIKVSEDGDLHTLGMLDYDKRLDHYFTSHPKLDPFTGEMFTFGYAQTPPYITYRVISKDGYMHDPVPITISDPIMMHDFAITENYAIFMDLPVYFRPKEMVKNNKLIFSFDSTKKARFGVLPRYAKDDKLIRWFELPNCFIFHNANAWEEEDEVVLITCRLKNLDLDMVSEDVKDKLESFSNELYEMRFNMKTGKASQKKLSAFSVDFPRVNERYTGRKQKYVYGTILDSITTGIVKFDLNAKPDFGKTKLEVGGNVHGIYDLGQGTFCSDPIYVPRVPGTDSEEDDGYLIFFVHDENTRKSFVHVIDAKTMSADPVAVVELPQRVPYGFHAFFLTEDQLQEQAKL* 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g1698 513 Pfam Retinal pigment epithelial membrane protein 51 502 IPR004294 GO:0016702
Mal5g1698 513 PANTHER CAROTENOID CLEAVAGE DIOXYGENASE 1-3 6 131 - -
Mal5g1698 513 PANTHER CAROTENOID CLEAVAGE DIOXYGENASE 1-3 132 509 - -
Mal5g1698 513 PANTHER BETA-CAROTENE DIOXYGENASE 132 509 IPR004294 GO:0016702
Mal5g1698 513 PANTHER BETA-CAROTENE DIOXYGENASE 6 131 IPR004294 GO:0016702
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g1698 Mal-Chr5 33483641 33516406 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g1698 5 33483641 33516406 Mal5g1698 5 33483641 33516406 ECH