Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g1693 ATGAAAGCTCTTACTGTTAATATTGAAGATTCTTTTCCTAGTTTACTGGTACTTGCTTCTCACAATGACTCTGAAGGTTTTAAGTCCCTCTTAGACAAAAAGGGAGATTCGTTAATTAACGAGGTGGGGGCTTGGTATGCTCGACAAAATGAGTCTAAGGAGATTATTTGTGCGCCCAAAACTCCTTTGATGGTTGCTGCTACTTATGGTAGTATCGATGTTATGAAGGTTATACTCTTGTTTCCGGACGTTGATGTGAATTTTGCTTGCGCGGTAAGCAAAAGCACTGCCCTTCACTGCGCTGCTTCCGGTGGGTCTACTAATGCTGTTGATGCAGTGAGGCTTCTTATATCGGCTGGTGCCAATGTTAATTGTCTCGATGCCAATGGGAATCGTCCTGTTGATGTCGTTGTTGTTCCTCCTAAGCTGCAGGACTTGAAAGTAGTTCTCGAGGAACTTCTTTTGGATAATGCCTCTGGCTCTGATAATAGATCTGTTGGTGACTTCTCTGTTTCGGTGTCTGTTGACTCTTCTATTTCTGGTTCGCTATGCTCCCCTTCAGTGTCACCGCCTTCTCCTGCGGTGGATTTGAAATTTACTGAGAAGAAAGAGTATCCAGTTGATCCATCATTTCCTGGTATAAAAAGCAGCATTTATGCAAGTGATGAATTTCGGATGTTTTCTTTCAAGGTCCTTCGTTGTTCCCGTGCACACTCTCATGATTGGACTGATTGTCCATTTGTGCATCCCGGAGAGAATGCTCGGAGGAGAGACCTTAGGAGGTTCTATTACAGCTGCGTGCCTTGCCCTGAATTTAGGAAAGGGACTTGTAGGTATGGAGATATGTGTGAATTTGCTCACGGAGTATTCGAGTGCTGGCTACACCCAGATCTGTACCGAACTCGTCACTGTGAAGATGGGACTAAGTGTAATCGAAAGGTGTGTTTTTTCGCTCACAGTGCAAAGGAATTGAGGCCTTCACCACATTCATATGCCTCTGCTCTTAATGTGATGAACATGGCTGCTGCATTGAACCTTTTGGTCGGTTCACCCTCGTCAGTCTCTTCCATGTCTCAATCTCATATTTCCCAGCCGATGTCCCCTTCTGCTTGGGCACAACAAAATGTTTCGACTCTTCATTGTCCAGGAAGCAATTTTCAGTCTAGTCAGTTGAGATCTTCTCTTGGTGCTCGCGGCATTCAGCCTAAAGACTTCAATGTGCTGAGCTATTTAGATGGGCAGCAGCACCTTATGAATGACATGAACTATTTCTCACAATCCGGTGCTAGTTCTTATCGGTCCAAGGCACTAACTCCATCTAATCTTGAAGACCTCTTTGCTGCAGAAATCTTGTCATCTGCCAGGTATTCCCCTTCGCAGAAATCAGCTGCTATGAATCAGATTAAACAGCTTCAAAACATGTTATCGCCTTCAAATACTAATATGCTGTCTCCCAAGAATGTTGAGCATAGTCTGTTACAGGCGTTCCCTAGAAGTGTTGAACCAATCTCCCCAAGGAGCCCTCAAATGTCTGCATTTGCTCATCGCGAGAAACAGAAGCAACAGCTGCGGAGTGTTAGTTCTAGGGACCTTGGCTCCAACATTCCGTCCTCAGTTGTCGGTTCACCTACAAACTCAAGGTCTAATTTGGGATCTCCTAATGGGATGACTGATTGCTCCGTAAATGGAGACGAATCCTCATTTGAACATGATATCAACGGGGAAGAGCCTGACCTATCATGGGTCAAAGTCCTAGTGAAGGACGCTTCTGAGACGATTAAAGGGAAGTTTGCATCTTCTAATGGATTGAATTCCAATTCGCAACAAATGAAACTTGATCAGCATGTATTCTAA 1854 0.4439 MKALTVNIEDSFPSLLVLASHNDSEGFKSLLDKKGDSLINEVGAWYARQNESKEIICAPKTPLMVAATYGSIDVMKVILLFPDVDVNFACAVSKSTALHCAASGGSTNAVDAVRLLISAGANVNCLDANGNRPVDVVVVPPKLQDLKVVLEELLLDNASGSDNRSVGDFSVSVSVDSSISGSLCSPSVSPPSPAVDLKFTEKKEYPVDPSFPGIKSSIYASDEFRMFSFKVLRCSRAHSHDWTDCPFVHPGENARRRDLRRFYYSCVPCPEFRKGTCRYGDMCEFAHGVFECWLHPDLYRTRHCEDGTKCNRKVCFFAHSAKELRPSPHSYASALNVMNMAAALNLLVGSPSSVSSMSQSHISQPMSPSAWAQQNVSTLHCPGSNFQSSQLRSSLGARGIQPKDFNVLSYLDGQQHLMNDMNYFSQSGASSYRSKALTPSNLEDLFAAEILSSARYSPSQKSAAMNQIKQLQNMLSPSNTNMLSPKNVEHSLLQAFPRSVEPISPRSPQMSAFAHREKQKQQLRSVSSRDLGSNIPSSVVGSPTNSRSNLGSPNGMTDCSVNGDESSFEHDINGEEPDLSWVKVLVKDASETIKGKFASSNGLNSNSQQMKLDQHVF* 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g1693 617 Gene3D - 5 154 IPR036770 -
Mal5g1693 617 Pfam CCCH-type zinc finger 268 288 IPR041367 -
Mal5g1693 617 MobiDBLite consensus disorder prediction 501 573 - -
Mal5g1693 617 ProSiteProfiles Ankyrin repeat profile. 93 128 IPR002110 GO:0005515
Mal5g1693 617 SMART ANK_2a 93 125 IPR002110 GO:0005515
Mal5g1693 617 SMART ANK_2a 10 39 IPR002110 GO:0005515
Mal5g1693 617 SMART ANK_2a 58 88 IPR002110 GO:0005515
Mal5g1693 617 MobiDBLite consensus disorder prediction 525 563 - -
Mal5g1693 617 ProSiteProfiles Ankyrin repeat region circular profile. 93 127 - -
Mal5g1693 617 Gene3D - 262 331 - -
Mal5g1693 617 SMART c3hfinal6 263 289 IPR000571 GO:0046872
Mal5g1693 617 ProSiteProfiles Zinc finger C3H1-type profile. 263 290 IPR000571 GO:0046872
Mal5g1693 617 PANTHER UNKEMPT FAMILY MEMBER 1 607 IPR045234 -
Mal5g1693 617 SUPERFAMILY Ankyrin repeat 14 139 IPR036770 -
Mal5g1693 617 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 56 1 607 - -
Mal5g1693 617 Pfam Ankyrin repeats (3 copies) 20 125 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g1693 Mal-Chr5 33415387 33417285 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Mal5g1693 Ank_2 3.1e-08 CL0465
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g1693 5 33415387 33417285 Mal2g4693 2 101658861 101661059 PCT