Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g1661 ATGAGCATTGTGTATACTCAAGCTTTCAATTACTCTGAAGGTGGTTCAATGAAGAACACAGAAATGGATTCAAAATTTGGTTACTCACAAACACAACAACATTGTCTCCAAAACAATTCCGGCTTAACGCGATTTCGTTCTGCTCCAAGCTCATTACTTACAAGCCTTGTAGACACAAGCATTGGATTTTTCACTGATGAAACTTTCAGAAATGAGAATCATCATCATAATCATAATCATAATCAGCATCAGCAGCATTATTCTCCCTCCACAAGTTCAGACATGGAAACCATGTTGACCAATTCTGAACCTTTGTATGAGTTTGTAGAGAAACCAATGAAGCAAGAAGAAAAAGACCCTTTTTCACATGGAATACAATACAATGATTACTCTTGTGCATCTCAAAATCAGATTATTTACCAAACACAGCAGAATCAAGGATTGTCAAATGTTTCTTTAGGTGTTGCAGGCAATGATTTTGATTCATTTGGTGCAGTGAGTTCTTTGGCTTCAGAAAATTACACAGAAGCTAAAATTGGTTCTTCTAATAATTGCTCCAATCTCATTAGGCAAAAGAGCTCCCCTGCTGAGTTTTTCTCCAATTATTCAGTTGATAATGGTTTTGCACCATTGAGAGAGGTGGGAAATGTTAAAGGTTGTAATGTCACAAATGGACAAGCTACTACATCAACTAGTGGATTGCATGGTACTATGAATTTCTCATCTAGACCAATCACTATGCCACTAATTGTTGAAAATGAACATGAAGCTCTTCAACCAAGTAGAAACGTGAGAAATGATAATGGTATCACTAAATGTTACATGCCCAGCTTCACCAATAACTATTGGAATAGTTCTACATTCAGTGCTCCAAAAATATCCACTAATAAAGTTGAAATCACCTTTTCCACTTCAAATGCTTTAGAAACTCAGGATGTGGATTTTGGATACCAAAAACTTGGTTTGAGCCATCATTTGAGTCTGCCTAGCTCTTCTACTAAGATGAGTACTATGGAGAAGTTTCTTCACATTCAAGGATCTGTTCCATGTAAAATTCGTGCCAAAAGAGGCTTTGCCACTCACCCAAGAAGCATTGCAGAGAGGGAAAGAAGAATAAGAATTAGTGCAAGAATCAAAAAATTGCAAGACCTTTTCCCAAATTCAGATAAGCAAACTAGCACATCTGACATGTTGGATGAAGCAGTTGAGTACATTAAAGACCTGAGGAAACAACTTAAGATACTAACAGACACGAAGGCAAAGTGCACTTGTACAAGTAATTAG 1284 0.3684 MSIVYTQAFNYSEGGSMKNTEMDSKFGYSQTQQHCLQNNSGLTRFRSAPSSLLTSLVDTSIGFFTDETFRNENHHHNHNHNQHQQHYSPSTSSDMETMLTNSEPLYEFVEKPMKQEEKDPFSHGIQYNDYSCASQNQIIYQTQQNQGLSNVSLGVAGNDFDSFGAVSSLASENYTEAKIGSSNNCSNLIRQKSSPAEFFSNYSVDNGFAPLREVGNVKGCNVTNGQATTSTSGLHGTMNFSSRPITMPLIVENEHEALQPSRNVRNDNGITKCYMPSFTNNYWNSSTFSAPKISTNKVEITFSTSNALETQDVDFGYQKLGLSHHLSLPSSSTKMSTMEKFLHIQGSVPCKIRAKRGFATHPRSIAERERRIRISARIKKLQDLFPNSDKQTSTSDMLDEAVEYIKDLRKQLKILTDTKAKCTCTSN* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g1661 427 Pfam Helix-loop-helix DNA-binding domain 364 408 IPR011598 GO:0046983
Mal5g1661 427 CDD bHLH_AtbHLH_like 363 415 IPR045239 -
Mal5g1661 427 SMART finulus 364 414 IPR011598 GO:0046983
Mal5g1661 427 Gene3D - 360 425 IPR036638 GO:0046983
Mal5g1661 427 MobiDBLite consensus disorder prediction 72 96 - -
Mal5g1661 427 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 31 426 - -
Mal5g1661 427 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 358 408 IPR011598 GO:0046983
Mal5g1661 427 Coils Coil 398 418 - -
Mal5g1661 427 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 31 426 - -
Mal5g1661 427 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 361 420 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g1661 Mal-Chr5 32693687 32703840 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mal5g1661 HLH 1.6e-09 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g4745 2 104227031 104230019 Mal5g1661 5 32693687 32703840 ECH
Mal5g1661 5 32693687 32703840 Mal5g1661 5 32693687 32703840 ECH