Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g1094 ATGGAAGGATTAGCTCCTAATTCATGTCCAAGGCAAGGATTAGAGAAGAAAGCAAGGCCACAAGAGCAAATAAATTGTCCAAGGTGCAATTCAACCAACACAAAATTTTGTTATTACAACAACTACAGTCTCACACAACCAAGATACTTTTGCAAGACATGTAGAAGGTATTGGACTGAAGGAGGATCTCTAAGAAATGTTCCTGTTGGAGGTGGTTCAAGAAAGAACAAGAAAATTCCTTCATCATTAGCCACACCTAATAATAGTTCATCAAAAATTCCTGACCTAAATCCACCAACCCTACAAGTTTCACATCTTTCATCTCAAAACCCTAAAATGCAAGGAGGCCAAGATCTTAACCTAGCTTTTCCATCTATGGAAAACTATCATCATCATCATGGTATGTCATCATCATATGTTGAGTTGCATAACAATAATGAATCATCTTCTTCAGCTCTTGACCTACTTAGGTCAAGCATGGCTTCTAGAGGCTTAAACCCTTATGCTAATAACAATAATTCTTTGATGCCAAACTCAAATGCTATTTATCCATCTGGATTCACCATGCAAGAAGTTAAACCTAGTCTTGGATTTTCAATTGATGGAATTAATGGAAATAGATCATATGATCATGTTCAAGTCCAAGAAGGTGGTGGAAGACTTTTGTTCCCTTTTGGAGATGTTAATAATAAACAGCTTTCTACAAGTGGTGTTGAAGTGGAACACAATAAAGATCAACAAGGAAATTCAACTGGATATTGGAGTGGAATGATTGGTGAAGGGTCATGGTAA 792 0.3674 MEGLAPNSCPRQGLEKKARPQEQINCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKKIPSSLATPNNSSSKIPDLNPPTLQVSHLSSQNPKMQGGQDLNLAFPSMENYHHHHGMSSSYVELHNNNESSSSALDLLRSSMASRGLNPYANNNNSLMPNSNAIYPSGFTMQEVKPSLGFSIDGINGNRSYDHVQVQEGGGRLLFPFGDVNNKQLSTSGVEVEHNKDQQGNSTGYWSGMIGEGSW* 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g1094 263 MobiDBLite consensus disorder prediction 65 120 - -
Mal5g1094 263 MobiDBLite consensus disorder prediction 78 116 - -
Mal5g1094 263 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 7 258 IPR045174 GO:0003700|GO:0006355
Mal5g1094 263 MobiDBLite consensus disorder prediction 1 22 - -
Mal5g1094 263 ProSitePatterns Zinc finger Dof-type signature. 26 62 IPR003851 GO:0003677|GO:0006355
Mal5g1094 263 ProSiteProfiles Zinc finger Dof-type profile. 24 78 IPR003851 GO:0003677|GO:0006355
Mal5g1094 263 Pfam Dof domain, zinc finger 22 78 IPR003851 GO:0003677|GO:0006355
Mal5g1094 263 MobiDBLite consensus disorder prediction 243 263 - -
Mal5g1094 263 PANTHER DOF ZINC FINGER PROTEIN DOF1.8 7 258 - -
Mal5g1094 263 MobiDBLite consensus disorder prediction 243 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g1094 Mal-Chr5 19369502 19370293 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g1094 16 263 C2C2-Dof Transcription Factor Family AT3G61850 52.347 1.12e-69 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Mal5g1094 zf-Dof 3.5e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g1094 - - gmx:778110 357.836
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g1094 5 19369502 19370293 Mal5g1094 5 19369502 19370293 ECH