Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0381 ATGGATCCATCATCCTCTCCCCGTTATCATTATCATAATGAGACTGATACCCTCCTCCTCCCTCACGTCCCTGGTTCCAAACTCCGCCTCATGTGCAGTTACGGCGGCCACATCATGCCACGTGACAGCTCCCTCTACTACGTCGGCGGCGACACTCGTATCATCGCCGTCGACCGTCACTCATCCTTATCACACCTCTGTTCTCACCTCTCTCGCACTCTCCTTCATGGAAAAAGACCTTTCACTCTGAAGTATCATCTTCCCAATGAAGACCTCGATAACCTCATCACTGTTTCCACTGATGAAGATCTCCAAAACTTGATAGATGAGTATGATCGTTTGTCTTCAAACCCTTCTCCTTCACCTTCTAGACTCAGATTGTTCCTGTTCTTCTCAAAACCAGATACTGCTGTTTCCATGGGTAATGATCACTTTGATAATCATGCTTGGTTTGTGGAAGCTCTCAACAACTCAGGGATTCTGTCTCGTGTTGTTTCTGACTCTGCAGCAGCTGCTGTTGATAACTGCCTCCTCAACCTTGATGATTATGATATAAGTGCTTCCAGCAATGATGAAAATGGTAATAATGTTAAAGAGCATTTGATTGATGTGGATTATTCAGTGCCTGTTGATGAGGAGGAAGAGAACATGTTTAATTATTCAATTGCTAATCTTCGTGTCCGTGATGATGAAGAGCAGCAGGATAAGAAGCAAGATGATGATTTACTTGTTTCTTCTTCTTATTATTATGCTGCCAGTGCGGGTGCCGGTGCCGGTGATGATTTCAATAGGGTTGTCTCTGATGATCGGAAGCCTCCTTTGCCGTCGCTCATATTGCAACCAAGGACCGCGGGAGCTGGCCTTGGTTTGCCTTCTCCAGATTCAGCTGCAAGTGATAGCAGTATTACATCTGCAAATTCTCTCACAAAAACTGTTGTTTACAATCAAGATCTAGTCCAAACTGCACATGTGGACAGCAAAGGCACCTCTTTGCCAAATAGTATCAAAAGTGAAGTATGTGATCAAGATCATCAATATTCTACTTACACCACCTCACCCCAACAAGAATTGGATCAAAATCAGCAACAAACCTCAACAACATATCAGCAACATCAATTTGTCTACATTCACCGTCCTATAGGAGCAACTCAAGTGCCAGTGTCATCATCCTACTACCCTTATTATGCCCCACCATCACAATCACACCAACAACTTCATCAGTATCCTGTTTATGTAATGCCAATTGGACATGGATCTACACAACCATACCAAATGGCTTTACAATCCAATATATCTGACACAAATGTGTTAGTCTCAGCTAGACCAAAAAATGCTGTACCTGAGGTGACTCCAAGTGTCTATAAAGCTCCAGTGGCATCAAATTCAGCTTTTGTTCGAATACATTCCAATCAATTTCAGCAGCAATATGTGAGTTTGCCTCAAAATCAAAATATTCATAATCCACCACAGCCTATTTATGGTTATGAATATGGTGGAGCTACACAAGGTCAAGTATACTACACACAACAACAGCATACAAATGCACCTCTTCAGTACCAATCCATGACCCCAGCACCTGCTGCCACAACACTATCAGATGTTTCAAAAGAAATTCCTATAGACAACAGCATTCAGCAGCAAAACAGAACTTCACAGCAAGTATAA 1665 0.4264 MDPSSSPRYHYHNETDTLLLPHVPGSKLRLMCSYGGHIMPRDSSLYYVGGDTRIIAVDRHSSLSHLCSHLSRTLLHGKRPFTLKYHLPNEDLDNLITVSTDEDLQNLIDEYDRLSSNPSPSPSRLRLFLFFSKPDTAVSMGNDHFDNHAWFVEALNNSGILSRVVSDSAAAAVDNCLLNLDDYDISASSNDENGNNVKEHLIDVDYSVPVDEEEENMFNYSIANLRVRDDEEQQDKKQDDDLLVSSSYYYAASAGAGAGDDFNRVVSDDRKPPLPSLILQPRTAGAGLGLPSPDSAASDSSITSANSLTKTVVYNQDLVQTAHVDSKGTSLPNSIKSEVCDQDHQYSTYTTSPQQELDQNQQQTSTTYQQHQFVYIHRPIGATQVPVSSSYYPYYAPPSQSHQQLHQYPVYVMPIGHGSTQPYQMALQSNISDTNVLVSARPKNAVPEVTPSVYKAPVASNSAFVRIHSNQFQQQYVSLPQNQNIHNPPQPIYGYEYGGATQGQVYYTQQQHTNAPLQYQSMTPAPAATTLSDVSKEIPIDNSIQQQNRTSQQV* 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0381 554 PANTHER OS05G0427100 PROTEIN-RELATED 4 546 - -
Mal5g0381 554 SUPERFAMILY CAD & PB1 domains 42 141 - -
Mal5g0381 554 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P FAMILY PROTEIN 4 546 - -
Mal5g0381 554 Gene3D - 46 131 - -
Mal5g0381 554 Pfam PB1 domain 41 130 IPR000270 GO:0005515
Mal5g0381 554 SMART PB1_new 40 132 IPR000270 GO:0005515
Mal5g0381 554 CDD PB1_UP2 31 130 - -
Mal5g0381 554 MobiDBLite consensus disorder prediction 261 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0381 Mal-Chr5 5860048 5861872 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g0381 4 129 MAP Kinase Kinase Kinase AT1G04700 39.844 5.91e-21 95.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g0381 5 5860048 5861872 Mal8g3798 8 110121960 110124528 ECH
Mal1g0414 1 4724638 4727205 Mal5g0381 5 5860048 5861872 ECH
Mal5g0381 5 5860048 5861872 Mal5g0381 5 5860048 5861872 ECH