Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0307 ATGAGAATCCAACGCTCTCACCATTTCCTCTTATTATCCATCCTCTTCTTCGCCGCCACATTCTCCAATCTCCGTTCAACAACCGCCACCGGAGCAGAACCTCCAACCACCACCGACGACGGTGACGCTGAATTCATCCGTTCAAGTTGCAACGCAACACTATACCCTGACATATGCTACACTTCCCTCTCTCGTTACGCCAATGCAGTTCAACAGAATCCCGGCCAACTCGCTCGCATCGCCATAGCCGTTAGCTTCTCCAAAGTCCACCGCACCGCCTCTTATCTCTCCAATCTCACTCGCGTAGCCGATTACAGCGGAAACTCACGCGCCGCACTTGCTCTTCATGATTGCTTCTCAAACCTCGACGACGCCGTTGATGAAATCCGCGGCTCGCTTAAACAGATGCGGCAGATTGGAGCCGCCGGAACTGGCGCCGGCGCCGGCGCAGGTTCGTTTCTGTTTCAGATGAGTAACGTGCAAACGTGGATGAGTGCGGCGCTTACAGATGAAGAGACGTGTACGGATGGATTTCAGGATGTAGAAGATTGTCCGGTGAAAGCGGATGTACAGGAACGTGTCTCGAAGGTGAAGAAGTTCACGAGTAATGCTTTAGCACTCGTTAATGGTTACGCGCAAAAAGGAATGCCTTGA 654 0.5245 MRIQRSHHFLLLSILFFAATFSNLRSTTATGAEPPTTTDDGDAEFIRSSCNATLYPDICYTSLSRYANAVQQNPGQLARIAIAVSFSKVHRTASYLSNLTRVADYSGNSRAALALHDCFSNLDDAVDEIRGSLKQMRQIGAAGTGAGAGAGSFLFQMSNVQTWMSAALTDEETCTDGFQDVEDCPVKADVQERVSKVKKFTSNALALVNGYAQKGMP* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0307 217 PANTHER PECTINESTERASE INHIBITOR-LIKE 9 214 - -
Mal5g0307 217 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR SUPERFAMILY PROTEIN 9 214 - -
Mal5g0307 217 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 44 209 IPR035513 -
Mal5g0307 217 Pfam Plant invertase/pectin methylesterase inhibitor 45 207 IPR006501 GO:0004857
Mal5g0307 217 CDD PMEI-like_3 48 212 - -
Mal5g0307 217 Gene3D Invertase/pectin methylesterase inhibitor family protein 41 211 IPR035513 -
Mal5g0307 217 SMART PMEI_2 41 207 IPR006501 GO:0004857
Mal5g0307 217 TIGRFAM PME_inhib: pectinesterase inhibitor domain 15 211 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0307 Mal-Chr5 5050011 5050664 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g0307 10 217 Carbohydrate Esterase AT5G53370 25.943 1.25e-14 70.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g0307 5 5050011 5050664 Mal5g0307 5 5050011 5050664 ECH