Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0303 ATGTGGGTTTTGAGAACTGTACCTTCTATATTTGTAGGTGCAACATTAGTTGTATCTGGTGATGGTCGTTATTATTCGGAGCAAGCAATTCAGATTATAACTAAAATGGCAGCAGCAAATGGAGTTAGACGTATTTGGGTTGGTCTAAATGGGATGCTTTCAACTCCTGCAGTATCTGCTGTTATACGTGAAAGAGTTGGGGTTGATGGATCCAAGGCAACAGGAGCATTTATACTGACAGCAAGTCACAACCCTGGCGGTCCTAATGAGGCGAGTACTGCTATGTTTTATTCTAAATCATTTTTGGAGGAATACGATTTTGGGATTAAATATAACATGGAAAATGGTGGACCTGCACCAGAGGGAATTACTAACAAAATATATGAATACACAACAACAATCAAGGAGTACTTGATTGCTCCAGATCTGCCAAATGTGGATATCACCACAGTAGGTGTCACAAACTTTACAGGGCCTGAAGGACCATTTGACGTTGAGGTTTTTGATTCAGCAAGCGATTATATAAAGTTGATGAAGTCAATTTTTGACTTTGGATCTATCAGGAAACTGCTGTCATCTCCTAAATTCACATTCTGTTATGATGCGTTACATGGAGTTGCTGGAGCTTATGCAAAGCGTATTTTTGTGGATGAGCTTGGGGCACAAGAAAGCTCTTTGCTGAACTGTGTACCAAAGGAAGACTTTGGAGGGGGACACCCAGACCCCAATTTGACATATGCAAAAGAATTGGTTGCTCGTATGGGACTGGGCAAATCAGAATCACAAGGTGAGCCCCCAGAGTTTGGTGCTGCTGCTGATGGTGATGCAGATCGCAACATGATACTTGGTAAAAGGTTTTTTGTCACTCCTTCGGATTCTGTGGCCATTATTGCCGCAAATGCTGTTGAAGCAATACCATACTTTTCTGCTGGCTTAAAGGGAGTTGCCAGGAGCATGCCAACATCTGCTGCCCTGGATGTTGTTGCCAAACATCTGAATTTGAAATTTTTTGAGGTCCCCACGGGTTGGAAGTTCTTTGGTAATTTAATGGACGCTGGATTGTGTTCAGTTTGCGGTGAAGAAAGTTTTGGGACTGGTTCGGATCACATTCGTGAGAAGGATGGAATCTGGGCAGTTTTGGCCTGGCTATCTATACTTGCATATAAAAATAAAGATAATCTTGAAGACAAGCTTGTAACTGTTGAAGACATAGTTCGTCAGCATTGGGCTAAATATGGGCGCCACTATTATACTCGATATGACTATGAAAATGTGGATGCAGGTGCAGCAAAGGAACTGATGGCACATTTAGTCAAACTGCAGTCCTCACTTTCAGAAGTCAATGAGATTGTTAAGGGGGCAAGTTCAGATGTTTCGAATGTTGTCCACGGTGATGAATTTGAATATAATGATCCTGTGGATGGTTCCATTTCATCACATCAGGGAATCCGATATTTGTTTGAGGATGGATCACGATTGATTTTCCGCCTCTCTGGAACTGGATCAGAAGGCGCAACTATTCGACTATACATTGAGCAATATGAGAAGGATCCATCAAAGATTGGGAGACTTTCACATGAAGCACTTGCTCCTCTTGTGGCGGCTGCATTGAAACTTTCAAAGATGGAAGAGTTCACCGGTCGATCTGCTCCCACAGTCATCACATAA 1668 0.4233 MWVLRTVPSIFVGATLVVSGDGRYYSEQAIQIITKMAAANGVRRIWVGLNGMLSTPAVSAVIRERVGVDGSKATGAFILTASHNPGGPNEASTAMFYSKSFLEEYDFGIKYNMENGGPAPEGITNKIYEYTTTIKEYLIAPDLPNVDITTVGVTNFTGPEGPFDVEVFDSASDYIKLMKSIFDFGSIRKLLSSPKFTFCYDALHGVAGAYAKRIFVDELGAQESSLLNCVPKEDFGGGHPDPNLTYAKELVARMGLGKSESQGEPPEFGAAADGDADRNMILGKRFFVTPSDSVAIIAANAVEAIPYFSAGLKGVARSMPTSAALDVVAKHLNLKFFEVPTGWKFFGNLMDAGLCSVCGEESFGTGSDHIREKDGIWAVLAWLSILAYKNKDNLEDKLVTVEDIVRQHWAKYGRHYYTRYDYENVDAGAAKELMAHLVKLQSSLSEVNEIVKGASSDVSNVVHGDEFEYNDPVDGSISSHQGIRYLFEDGSRLIFRLSGTGSEGATIRLYIEQYEKDPSKIGRLSHEALAPLVAAALKLSKMEEFTGRSAPTVIT* 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0303 555 SUPERFAMILY Phosphoglucomutase, first 3 domains 9 202 IPR016055 GO:0005975|GO:0016868
Mal5g0303 555 Pfam Phosphoglucomutase/phosphomannomutase, C-terminal domain 462 525 IPR005843 GO:0016868|GO:0071704
Mal5g0303 555 ProSitePatterns Phosphoglucomutase and phosphomannomutase phosphoserine signature. 76 85 IPR016066 GO:0000287
Mal5g0303 555 SUPERFAMILY Phosphoglucomutase, C-terminal domain 414 555 IPR036900 GO:0016868|GO:0071704
Mal5g0303 555 Gene3D - 9 180 - -
Mal5g0303 555 PANTHER PHOSPHOHEXOMUTASE FAMILY MEMBER 72 555 IPR045244 GO:0004614|GO:0005975
Mal5g0303 555 PANTHER PHOSPHOHEXOMUTASE FAMILY MEMBER 8 73 IPR045244 GO:0004614|GO:0005975
Mal5g0303 555 Pfam Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 14 137 IPR005844 GO:0005975|GO:0016868
Mal5g0303 555 PANTHER BNAA09G30060D PROTEIN 72 555 - -
Mal5g0303 555 PANTHER BNAA09G30060D PROTEIN 8 73 - -
Mal5g0303 555 Gene3D - 287 385 - -
Mal5g0303 555 Gene3D - 181 286 - -
Mal5g0303 555 Pfam Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 290 412 IPR005846 GO:0005975|GO:0016868
Mal5g0303 555 Pfam Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 173 282 IPR005845 GO:0005975
Mal5g0303 555 SUPERFAMILY Phosphoglucomutase, first 3 domains 172 287 IPR016055 GO:0005975|GO:0016868
Mal5g0303 555 Gene3D - 394 555 - -
Mal5g0303 555 SUPERFAMILY Phosphoglucomutase, first 3 domains 274 419 IPR016055 GO:0005975|GO:0016868
Mal5g0303 555 PRINTS Phosphoglucomutase/phosphomannomutase family signature 75 89 IPR005841 GO:0005975|GO:0016868
Mal5g0303 555 PRINTS Phosphoglucomutase/phosphomannomutase family signature 266 281 IPR005841 GO:0005975|GO:0016868
Mal5g0303 555 PRINTS Phosphoglucomutase/phosphomannomutase family signature 231 244 IPR005841 GO:0005975|GO:0016868
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0303 Mal-Chr5 4973760 4979972 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g0303 5 4973760 4979972 Mal5g0303 5 4973760 4979972 ECH