Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0302 ATGAGTACCCATTTCATTTTATTATTCACCATTATTTTCTTCTCAACAATTTTGCCACAATCCAACTCTCAAAAAAATGACACCTTTTCTACTTGCAACCAATCATATTTCACATGTGGAACAAACACAGATGTATCATTTCCTTTCTGGGGAAAAAACCGACCAAATTTTTGTGGCAAAAATGAGTTCAAACTCACTTGCATGCATAACCAAAACACTTCTATTCAAATTGGTTCACAAAAGTTCAATGTACTAAACATTAACCAAACAGCTTCTACCATGAAAATGGTTAGAACAAATCTTATCAATGATATTTGTTCTTCCAATTTCACCAACACTTCTTTGAATGGAACTCCATTTACTTTTCTTCCAAACGTTCAGAATCTCACTGTATTCTATAATTGTCCCATTGAGAGTAGTTCAATTATAGGAAAAAACATAAACAGTTTTACGTGTGATAATAATAGTAGCAATAAACATGTTTTCTACGTGGTGAAGAATGAAACTCAGCTACAAAACCAATTCTCAAACCTTCAGAAATGTGGGGTTAGTGTTCAAGTGCAAGTTTCTATTGATGGTGTTTCTGAGAGTGGAGTTGAAGTACTGCAACATGGATTTGATGTGAAGTATGATGAAGGTGCAGGGTGGTCCTCTGAGTGTGAAGTGTGTAGGGAATCTGGAGGAACTTGTGGTACCAATCAGAATGATTCTTCTCAATTTTCTTGTTATTGTCCTGATGGAACTCATGCTGCACAGTGTTCTGCTCACAAAAGTAGCAAAAAGAGCAAAGTTTTGAAGCTGGTTTTAGGTTTCATAGGTACTGGAATGTTACTACCTCTTATTGCTGTCATAATATGCCGAAATAAAGCTAAGATATGGAAGGTTTTAAAAACACAATTCAGCAAAATAACAAGGAACAATCAACACATAGAAGCCTTCCTTGAAAGTCAAGGTCCTCTGAATATAAAAAGATACAGTTACTCTGATATAAAGAAAATGACTGAGTCCTTCAAAGTTAAACTAGGAGAAGGTGGTTATGGTTCTGTATACAAAGGAAAATTGCTCAATGGTGGTTCTGTGGCTGTAAAACTATTGAATGAGTCAAAAGGGTGTGGAGAAGATTTCATCAATGAAGTAGCAAGTATATGCAAGACATCTCATGTTAATGTTGTCACTCTCTTAGGATTTTGTCTTGATGGAACCAAAAAAGCTCTCATCTATGAGTTTATGTCCAATGGTTCACTTGAAAAGTTCATTCACAATCAGAACAAAGAATCCGAGAAGACCGAAAAAACTAAAACTAGTCCTTCATTGAGTTGGGAGAATTTACACCAGATTGCAATAGGGATAGCTCGAGGACTAGAGTACTTGCATAAAGGATGCAACACTAGGATTCTTCATTTCGACATTAAACCACATAACATTCTTTTGGACGAAACTTACCGTCCGAAGATATCTGATTTTGGACTTGCTAAACTAAGCACAAGGGATGAGAGCAATATTTCAATGTCAAATGCTAGAGGGACGGTCGGATATGTAGCTCCTGAAGTGTTTAACAAAAGCTTCGGAGGCGTTTCACATAAGTCTGATGTCTATAGTTACGGAATGATGTTGCTAGAAATGGTTGGTGGACGAAAGAATGTTAACATTGTTGAAGCTAGTGGTTCGAGCGAGTTATATTTTCCACATTTGGTGATTTATAAGAAGCTTGAGCATGGAAATGATTTGGAACTTGATGATGAGGTAATGTCTAATGAAGAAAATGAGATAGCTAAGAAATTGACTATGGTTGGTTTGTGGTGCATTCAAACAATTCCTACACATAGACCTACAATAAGTAAAGTGATTGATATGTTGGAAGGTAGCATGGATTCTTTGGAAATGCCACCAAAACCTGTTATGTTTTCTCCTCCAAGATCAATACCAGAATTTTCTACTTCATCAAAATCATTGGAATTGGAAAGTTTCTCTAATTAA 1977 0.3591 MSTHFILLFTIIFFSTILPQSNSQKNDTFSTCNQSYFTCGTNTDVSFPFWGKNRPNFCGKNEFKLTCMHNQNTSIQIGSQKFNVLNINQTASTMKMVRTNLINDICSSNFTNTSLNGTPFTFLPNVQNLTVFYNCPIESSSIIGKNINSFTCDNNSSNKHVFYVVKNETQLQNQFSNLQKCGVSVQVQVSIDGVSESGVEVLQHGFDVKYDEGAGWSSECEVCRESGGTCGTNQNDSSQFSCYCPDGTHAAQCSAHKSSKKSKVLKLVLGFIGTGMLLPLIAVIICRNKAKIWKVLKTQFSKITRNNQHIEAFLESQGPLNIKRYSYSDIKKMTESFKVKLGEGGYGSVYKGKLLNGGSVAVKLLNESKGCGEDFINEVASICKTSHVNVVTLLGFCLDGTKKALIYEFMSNGSLEKFIHNQNKESEKTEKTKTSPSLSWENLHQIAIGIARGLEYLHKGCNTRILHFDIKPHNILLDETYRPKISDFGLAKLSTRDESNISMSNARGTVGYVAPEVFNKSFGGVSHKSDVYSYGMMLLEMVGGRKNVNIVEASGSSELYFPHLVIYKKLEHGNDLELDDEVMSNEENEIAKKLTMVGLWCIQTIPTHRPTISKVIDMLEGSMDSLEMPPKPVMFSPPRSIPEFSTSSKSLELESFSN* 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0302 658 SUPERFAMILY Protein kinase-like (PK-like) 314 620 IPR011009 -
Mal5g0302 658 ProSitePatterns Protein kinases ATP-binding region signature. 341 363 IPR017441 GO:0005524
Mal5g0302 658 Gene3D Transferase(Phosphotransferase) domain 1 410 629 - -
Mal5g0302 658 ProSitePatterns Serine/Threonine protein kinases active-site signature. 465 477 IPR008271 GO:0004672|GO:0006468
Mal5g0302 658 PANTHER RUST RESISTANCE KINASE LR10-RELATED 7 652 IPR045874 GO:0004672
Mal5g0302 658 PANTHER GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE, PROTEIN KINASE RLK-PELLE-LRK10L-2 FAMILY-RELATED 7 652 - -
Mal5g0302 658 MobiDBLite consensus disorder prediction 637 658 - -
Mal5g0302 658 Pfam Wall-associated receptor kinase C-terminal 152 247 IPR032872 -
Mal5g0302 658 Gene3D Phosphorylase Kinase; domain 1 309 409 - -
Mal5g0302 658 Pfam Wall-associated receptor kinase galacturonan-binding 32 97 IPR025287 GO:0030247
Mal5g0302 658 ProSiteProfiles Protein kinase domain profile. 335 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g0302 658 Pfam Protein kinase domain 338 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g0302 658 SMART serkin_6 335 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g0302 658 MobiDBLite consensus disorder prediction 640 658 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0302 Mal-Chr5 4962673 4965995 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g0302 7 649 Receptor kinase-like Gene Family AT5G38260 39.417 6.90e-153 454
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Mal5g0302 Pkinase 4.3e-46 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g0302 5 4962673 4965995 Mal5g0302 5 4962673 4965995 ECH